| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3595 |
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| Symbol | |
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| ID | 4024109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4007919 |
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| End bp | 4008572 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637963799 |
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| Product | 2OG-Fe(II) oxygenase |
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| Protein accession | YP_570719 |
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| Protein GI | 91978060 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.363359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.818593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCACAG CCGATCTGTT CGAGGGTGTG TTTGATGCGC CGCGGCGCGA GGAGATCGCG
CCGGGCGCGG CGCTGCTGCA CGGCTTCGCC CGCGCGCAGG AGCGCGACCT GATCGCGGCG
ATCGACGCCG TCGTCGCGCG CGCGCCGTTC CGCCACATGA TGACGCCGGG CGGCCACGCC
ATGAGCGTGG CGATGACGAG TTGCGGCCGC GTCGGCTGGG TCACCAACCG AAGCGGCTAT
CGCTACGCGA CGCATGATCC GCAGAGCGAT CGACCGTGGC CGGAGATGCC GGCGGTGCTG
CGTGATCTCG CGATCGGTGC GGCGGCGGAA GCGGGCTTCG CCGGTTTCGA TCCGGATGCC
TGCCTGATCA ACCGCTACGC GCCCGGCGCC AGGATGGCGC TGCATCAGGA CAGAGACGAG
CAGGATTTTT CCGCGCCGAT CGTCTCGGTG TCGCTCGGCC TGCCGGCGAT CTTCCAGTTC
GGCGGGATGG CGCGCAGCGA CAAGCCGCGC CGCTTCGAGC TACGCCATGG CGATGTGCTG
GTGTGGGGCG GCGAGAGCCG GCTGGTGTAT CACGGCGTGC TGGCGTTGAA GGACGGCGAC
CACCAGCTGC TCGGCCGCCA GCGCATCAAT CTGACCTTCC GCAAGGCGCT GTAG
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| Protein sequence | MATADLFEGV FDAPRREEIA PGAALLHGFA RAQERDLIAA IDAVVARAPF RHMMTPGGHA
MSVAMTSCGR VGWVTNRSGY RYATHDPQSD RPWPEMPAVL RDLAIGAAAE AGFAGFDPDA
CLINRYAPGA RMALHQDRDE QDFSAPIVSV SLGLPAIFQF GGMARSDKPR RFELRHGDVL
VWGGESRLVY HGVLALKDGD HQLLGRQRIN LTFRKAL
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