| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3593 |
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| Symbol | |
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| ID | 4024107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4005364 |
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| End bp | 4006239 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963797 |
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| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
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| Protein accession | YP_570717 |
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| Protein GI | 91978058 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.309889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.815816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC CCCGTCTCGC CACCTTCACC GTCAACGGCC TCACGCGCTA CGGCGCGGTG
TGCGACAATG GCGTCGTCGA TCTGTCGGCG CGCCACGCCA ACGATTATCC GACCCTGCGC
GAGGTGATCG CCGCCGGCGC GCTGACGCGG ATCGTCGATG AGGCCGCCGG CCTCGCGCCG
GATTTCGCCC GCGACGCGAT GGTGTATCAT CCGCCGATCC CGCAACCCGA AAAGATCATC
TGCGTCGGCG TCAACTATCC GGATCGAACC GCCGAGTACA AGGACGGCAG CGAGGCGCCG
AAATTCCCCA GCATGTTCAT GCGCACCGCG CGCTCCTTCG TCGGCCACGG CGCGTCCTTG
GTGCGGCCGC GCACCTCGAA GCTGCTCGAC TATGAGGGCG AGCTGACGCT GGTGATCGGC
AAGCCCGGCC GCCATATCGC GGAAGCCGAT GCGCTCGACC ATGTCGCCGC GATCACGCTG
TGCAACGAGG GCACGATCCG CGACTGGGTC CGCCACGCCA AGTTCAACGT CACGCAGGGC
AAGAATTTCG ACCACACCGG CAGCCTCGGC CCGTGGCTGG TACCGTTCAC CGGCGAAGCG
CAGATCGCCG ACATCCGCCT CACCACCCGC GTCAACGGCG ACACCCGGCA GGACGACCGC
ACCTCGCGGA TGATCTTCGG CTTCCGCTAT CTCATCCACT ACATCTCGAC CTTCACCACG
CTGGTGCCGG GCGATCTGAT CGTCACCGGC ACCCCGGCCG GCGCCGGCGC GCGCTCCGAT
CCGCCGGTGT ATCTCGCACC CGGCGACATC ATCGAGGTCG AGGCCGACGG CATCGGGACC
TTGCGCAACG GCGTGATCGA CGAAGCGGCA GCGTAG
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| Protein sequence | MTTPRLATFT VNGLTRYGAV CDNGVVDLSA RHANDYPTLR EVIAAGALTR IVDEAAGLAP
DFARDAMVYH PPIPQPEKII CVGVNYPDRT AEYKDGSEAP KFPSMFMRTA RSFVGHGASL
VRPRTSKLLD YEGELTLVIG KPGRHIAEAD ALDHVAAITL CNEGTIRDWV RHAKFNVTQG
KNFDHTGSLG PWLVPFTGEA QIADIRLTTR VNGDTRQDDR TSRMIFGFRY LIHYISTFTT
LVPGDLIVTG TPAGAGARSD PPVYLAPGDI IEVEADGIGT LRNGVIDEAA A
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