| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3591 |
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| Symbol | |
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| ID | 4024105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4002506 |
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| End bp | 4004062 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963795 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_570715 |
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| Protein GI | 91978056 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.943045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.901126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGG CCGCCACCGC CGGGACGAAC GATCCGGCCG CCGCGTTTCG GGCCAATCAG
GAGCGCGCTG CGCCGCTGTT GAAGCGACTG ACCGCCGACG GCATCGGCCA CCTGATCGAC
GGCGCGATCG TGCCGTCGTC ATCGGGCGAC GTGTTCGAGA CACATTCGCC GATCGACAAC
ACGGTGCTGG CGCAGGTCTC GCGCGGCACA ATTGAGGACA TCGACCGCGC CGCGCAGGCG
GCGAAGCGGG CGTTTCCGGC GTGGCGCGAC ATGCCGGCGC CGGCGCGGCG CAAGCTGCTG
CACAGGGTCG CGGACGCGAT CGAGGCGCGC GCAGACGACA TCGCCGTGCT GGAATGCATC
GACACCGGGC AAGCTCACCG CTTCATGGCG AAGGCCGCGA TCCGCGCCGC CGAGAATTTC
CGTTTCTTCG CCGACAAATG CACCGAGGCG CGCGACGGCC TCAACACGCC GAGCGACGAG
CATTGGAACG TTTCGACCCG GGTGCCGATC GGCCCGGTCG GGGTGATCAC GCCGTGGAAC
ACGCCGTTTA TGCTGTCGAC CTGGAAGATC GCGCCTGCAC TCGCGGCCGG CTGCACTGTG
GTGCACAAGC CGGCGGAATG GTCGCCGGTG ACCGCCGATC TGTTGTCGCA ACTCTGCAGG
CAGGCCGGCC TGCCCGACGG CGTGCTCAAC ACCGTGCACG GTTTCGGCGA GGAAACCGGC
AAGGCCTTGA CCGAGCATCC CGCCATCAAG GCGATCGCCT TCGTCGGCGA AACCGCCACG
GGCGCTGCGA TCATGGCGCA GGGCGCGCCG ACGCTGAAGC GCGTGCATTT CGAACTCGGC
GGCAAGAACC CGGTGATCGT GTTCGACGAC GCCGATCTCG ACCGCGCGCT CGACGCCGTG
GTGTTCATGA TCTACTCGCT CAACGGCGAG CGCTGCACCT CGTCGAGCCG GCTGCTGATC
CAGCAATCGA TCGCCGACAC CTTCATCGAC AGGCTCGCGG CCCGCGTGCG CACACTGAAG
GTCGGCCATC CGCTCGATCC CGCGACCGAG ATCGGCCCGC TGATCCATCA GCGTCATCTC
GACAAGGTCT GCTCCTATTT CGATATCGCC CGAAAGGCCG GCGCGACCAT CGCGGTCGGC
GGCGCGCGGC ATGACGGGCC GGGCGGCGGC CATTACGTGC AGCCGACGCT GGTGACCGGC
GCGCGCAGCG ACATGCAGGT CGCGCAGGAG GAAGTGTTCG GGCCGTTCCT CACCGTGATC
CCGTTCCGCG ACGAGGCGGA CGCGATCCGT ATCGCCAATG ATGTCCGCTA CGGCCTCGCC
GGCTATGTCT GGACCGCCGA CATCGGCCGC GCGCTCCGCG TCGCCGACGC GCTGGAGGCC
GGGATGATCT GGCTGAACTC GGAGAACGTC CGCCATCTGC CGACCCCGTT CGGCGGCATG
AAGCAATCCG GCATCGGCCG CGACGGCGGC GACTACTCGT TCGAGTTCTA CATGGAAACC
AAACACGTCT CGCTCGCGCG CGGCACGCAC AAGATCCAGA GACTGGGGGC TGTGTAG
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| Protein sequence | MAEAATAGTN DPAAAFRANQ ERAAPLLKRL TADGIGHLID GAIVPSSSGD VFETHSPIDN
TVLAQVSRGT IEDIDRAAQA AKRAFPAWRD MPAPARRKLL HRVADAIEAR ADDIAVLECI
DTGQAHRFMA KAAIRAAENF RFFADKCTEA RDGLNTPSDE HWNVSTRVPI GPVGVITPWN
TPFMLSTWKI APALAAGCTV VHKPAEWSPV TADLLSQLCR QAGLPDGVLN TVHGFGEETG
KALTEHPAIK AIAFVGETAT GAAIMAQGAP TLKRVHFELG GKNPVIVFDD ADLDRALDAV
VFMIYSLNGE RCTSSSRLLI QQSIADTFID RLAARVRTLK VGHPLDPATE IGPLIHQRHL
DKVCSYFDIA RKAGATIAVG GARHDGPGGG HYVQPTLVTG ARSDMQVAQE EVFGPFLTVI
PFRDEADAIR IANDVRYGLA GYVWTADIGR ALRVADALEA GMIWLNSENV RHLPTPFGGM
KQSGIGRDGG DYSFEFYMET KHVSLARGTH KIQRLGAV
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