Gene RPD_3583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3583 
Symbol 
ID4024097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3991491 
End bp3992369 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content67% 
IMG OID637963787 
Producttransglutaminase-like 
Protein accessionYP_570707 
Protein GI91978048 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.162461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTACG ATATCCGCCA CGTCACCAGC TACAGCTACG GCAGCCAGGT CAGCTTCGCG 
CGCTGCTCGC TGCGGCTGAA GCCGCTCAGC GACGCCAGCC AGAAACTGAT ATCGCATAGC
ATTGAGATCA AGCCGCGTCC GGCGACGCGG GCGACACGGG TGGATTTCTT CGGCATCCCG
ACCGAAAGCA TCGTGATCGA GACGCCGCAC AAGGTGCTGC GGATCGACAG CCGCTCGCGC
GTCGAGGTCA ACCGCATTCC GCCGGCGCGC GACAGCGGCA GCACCGCGTG GGAACGCGTC
TGCGAGGCGG CGCTGGATTG CGCGAGCCTC GGCGCCGATG CGCCGGTCGG CTACGTGTTC
CCGAGTTCAC TGGCGCCGGT TCAGCGCGCC GTGACCCGAT ACGCCGCCGA GAGCTTTCCG
CCGGCGCGCG GCGTTCTCGC CGGCGCGGCG GATTTGATGC GCCGGATCCG CCGCGAGTTC
AAATACGATC CGAAGGCGAC GGTGATCTCG ACGCCGCTCG CCGAAGTATT CGAGAAGCGC
CATGGCGTCT GCCAGGATTT CGCCCATGTG ATGATCGCGG GGCTGCGCGG GCTCGGCCTG
CCTGCCGCCT ATGTCAGCGG TTATTTGCGC ACCTATCCGC CGGCGGGACA GCCGCGGCTG
CAGGGCGCGG ACGCCACCCA CGCCTGGGTG TCGTTGTGGT GCGGCAACGA GACCGGATGG
GTCGGGTTCG ATCCGACCAA CGATCTGTTG ATCGGCAACG ATCACATCGT GCTCGCGGTG
GGGCGTGATT TCTCCGACGT CTCGCCGGTC GACGGCGTGA TCGTCGGCTC GCGCAGGCAG
AAGCTCTCCG TCGCGGTCGA CGTCATCCCG GTCGAATAG
 
Protein sequence
MIYDIRHVTS YSYGSQVSFA RCSLRLKPLS DASQKLISHS IEIKPRPATR ATRVDFFGIP 
TESIVIETPH KVLRIDSRSR VEVNRIPPAR DSGSTAWERV CEAALDCASL GADAPVGYVF
PSSLAPVQRA VTRYAAESFP PARGVLAGAA DLMRRIRREF KYDPKATVIS TPLAEVFEKR
HGVCQDFAHV MIAGLRGLGL PAAYVSGYLR TYPPAGQPRL QGADATHAWV SLWCGNETGW
VGFDPTNDLL IGNDHIVLAV GRDFSDVSPV DGVIVGSRRQ KLSVAVDVIP VE