| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3579 |
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| Symbol | |
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| ID | 4024093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3984365 |
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| End bp | 3986731 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963783 |
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| Product | RND superfamily transporter |
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| Protein accession | YP_570703 |
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| Protein GI | 91978044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.900215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACA AGAACATCAA CGACGCCGAC ATCGACGAGA CCAACCGGCG CCGGCTCAGC
ATTGCTTTCG GGCTGGAGCG GATGGGGCTG ATCGCGGTGC GCGCGCCGAT CCTCTCCTGC
GTGGTTCTCG CAATCCTGAT CGTCGCGGCG ATCTTCGGCA TCCAGCGGAT CAAGATCGAC
GATTCGCTGA GTCAGCTGTT CCGCTCCGAC TCCAAGGAGT TCCAGCAATA CGAGCAGGTC
ACCAAGCGTT TCCCCTCGAC CGAATTCGAC GTGCTGGTGG TGGTCGAAGG CAAGACGCTG
CTCGCGCGCG ACAATCTCGA GAAGCTGCGC GATCTCGTCA CCGACATGCA GCTCGTCGAC
GGCGTCCGCG GGCTGATCTC GCTGTTCTCG GCGCGGCAGG CGCCGGAGCC GGGCAGGCTG
CCGGCGGCGC TGTTTCCCAA TGAACTGCCG GAAGGCGACG CCTACGACAA GTTCATCGAG
ACGGTGAAGT CGAATGAGAT CATCCGCGGC AAGCTGTTGT CGGAGGATGG CACGCTGGCG
CTGGTCGTGC TGTCGCTGGA CCCGGAGATC GTCGGCAACA ACAAGCTCGC CAGGACGATC
GGCGAAATCC GCAAGGTGAT GGCCGAGGAC CTCGCAGGCG CCGACCTGTC GCGGCAATTG
TCCGGCGTTC CGGTGATGCA GCTCGAAATC CGCAACGCGG TCGAGCGCGA CGGGCTGATC
TACAACATCG CCGGCATCCT CGCCGGCTGC GTGATCGCGA TCCTGTTCTT CCGCAAGATC
TCGTTCATGG TGGTCGCGGC GTTCCCGCCG CTGCTGGCGA TCCTGCTGTC GCTCGGCGTG
CTCGGCTGGG CCGGCTTCAG CCTCAACATG TTCCTGAATG TGATGACGCC GCTGATCATG
GTGATCAGCT TCGCGGATTC GATGCAGCTC ACCTTTGCGG CCAGAGACAG GCTGATCGCC
GGCGAAGACA AATACACCGC ATTCCGCAAC GCCGTGCTGG TGGTCGGCCC GGCCTGTGTG
CTGACCCATG CCACCGCTGG CATTTCCTTC ATCGCGCTGC AGTTCTCCGA TTCCGATCTG
ATCCGCGCTT TCGGCGAGGC CGGTCTCGTT GCCACCGTGA TCGCGCTGGT CGCGGTGCTG
TCGCTGGTGC CGGTGTTCGG CGTGCTGCTG GTGCGCAACG AGCAGGCGTT CGCCGCGAAG
TTTCAGAGCG GCGATCTCGG CGTCAATGCG CTGCGCCGGT TCTGCGCCTT CATCGCGGTG
CGGATGGTCG GGCGTCCCGG CCTGTTCAGC CTGCTGGCGC TGCTGCTCGT CGGCGGCCTC
GGCGTGATCT ACGCCAATCT CGAACCGCGC TACCGGCTTG CCGATCAGGT GCCCGACAAG
CAGCAGGCGG TGCAGGCCAG CGACCGGCTC GACGCCAAGC TGACCGGCGC CAATCCGATC
GACGTTCTGA TCGAGCTGCC CAAGGGCCAG ACGCTGTATT CGCCCGAGAC TTTGCAGACC
ATCGCCGACG TCCACGCCAT GGTCGAGAAA CAGGCCGGCG TCGGCAATGT CTGGTCGCTG
GAGACGCTGC GCCGCTGGCT CGCCGAAAAG GCGCGGACCG ACGACGTCGC GACGCTCAAG
GAATATGTCG ACGTCATTCC CGAGCATCTG GTGCGGCGCT TCATCTCCGC CGACCAGGCC
GCGGTGGTGG TGTCCGGCCG GGTGCCGGAT CTGGATTCCA GCGAGATCCT GCCGGTGGTG
CAGAAGCTCG ACAAGGCGCT CGACGCCGTG CGGCAGAAAC ACCCCGGCTA CGAGGTCGCG
GTCACCGGCC TGTCGGCGAT CGCCGCGCGC AACAGCGCCG ACATGATCTC GAAGCTCAAC
CACGGCCTCA CCATCGAATT CCTTCTGGTG GCGGTGTTCA TCGGGCTCGC GTTCCGCTCG
GTGGTGGTGA TGCTGGCCTG CATCCTGCCG GGCATCTTCC CGGTGGTGCT GTCGGGCACG
CTGCTCTGGG TAATGGGGGA GGGGCTGCAG TTCGCCAGCG TGGTGGCGCT GACGGTGTCG
TTCGGTCTCG GCCTCAGCGC GACGATCCAC TTCCTCAACC GGCTGCGGCT GGAAAGTCCG
CCCGGCGCCA GCGCCGCGGT CGCGGTCGAG CGCGCCACCG TGCTGGTCGG GCCGGCGCTG
ATCCTCACCA CCGTGGTGCT GGCCTGCGGC CTCGGCGTCA CGGTGTTCTC CGACCTGCCG
TCGCTGCGGC TGTTCGGCTG GCTCAGCGCA TTTGCGATGG TCGCCGCGCT GGTCGCCGAT
TTGTTCATCC TGCGCCCGAC CGCGATGTGG CTGATCGGCA TGGCGGAGCG TCTGCGCGGC
AACCGCAAGC CCAAGGCGGC CATGTAG
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| Protein sequence | MLHKNINDAD IDETNRRRLS IAFGLERMGL IAVRAPILSC VVLAILIVAA IFGIQRIKID
DSLSQLFRSD SKEFQQYEQV TKRFPSTEFD VLVVVEGKTL LARDNLEKLR DLVTDMQLVD
GVRGLISLFS ARQAPEPGRL PAALFPNELP EGDAYDKFIE TVKSNEIIRG KLLSEDGTLA
LVVLSLDPEI VGNNKLARTI GEIRKVMAED LAGADLSRQL SGVPVMQLEI RNAVERDGLI
YNIAGILAGC VIAILFFRKI SFMVVAAFPP LLAILLSLGV LGWAGFSLNM FLNVMTPLIM
VISFADSMQL TFAARDRLIA GEDKYTAFRN AVLVVGPACV LTHATAGISF IALQFSDSDL
IRAFGEAGLV ATVIALVAVL SLVPVFGVLL VRNEQAFAAK FQSGDLGVNA LRRFCAFIAV
RMVGRPGLFS LLALLLVGGL GVIYANLEPR YRLADQVPDK QQAVQASDRL DAKLTGANPI
DVLIELPKGQ TLYSPETLQT IADVHAMVEK QAGVGNVWSL ETLRRWLAEK ARTDDVATLK
EYVDVIPEHL VRRFISADQA AVVVSGRVPD LDSSEILPVV QKLDKALDAV RQKHPGYEVA
VTGLSAIAAR NSADMISKLN HGLTIEFLLV AVFIGLAFRS VVVMLACILP GIFPVVLSGT
LLWVMGEGLQ FASVVALTVS FGLGLSATIH FLNRLRLESP PGASAAVAVE RATVLVGPAL
ILTTVVLACG LGVTVFSDLP SLRLFGWLSA FAMVAALVAD LFILRPTAMW LIGMAERLRG
NRKPKAAM
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