| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3571 |
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| Symbol | |
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| ID | 4024085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3975928 |
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| End bp | 3977088 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637963775 |
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| Product | radical SAM family protein |
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| Protein accession | YP_570695 |
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| Protein GI | 91978036 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.22168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATAC CGTTTCACAA GGAGATCCGG ATCGGCGGCT ATCTGCTCAA GCAGAAGCTG
CTGGGCCGCA AGCACTACCC GCTGGTGCTG ATGCTCGAGC CGCTGTTCCG TTGCAATCTG
GCCTGCGTCG GCTGCGGCAA GATCGATTAT CCCGATGCGA TCCTGAACCG CCGGATGTCC
GCGCAGGAAT GCTGGGACGC CGCCGAGGAA TGCGGCGCGC CGATGGTTGC GATCCCGGGC
GGCGAGCCGC TGATCCACAA GGAGATCGGC GAGATCGTGC GCGGCCTGGT GGCGCGCAAG
AAGTTCGTGT CGCTGTGCAC CAACGCGCTG CTGCTCGAGA AGAAGCTGCA CCTGTTCGAG
CCGTCGCCGT TCCTGTTTTT CTCGGTGCAT CTCGACGGCC TGAAGGATCA TCACGACAAG
GCGGTGTCGC AGGCCGGCGT GTTCGATCGC GCGGTGTCGG CGATCAAGGC GGCGAAGGCC
AAGGGCTTCA CCGTCAACGT CAACGCGACG ATCTTCGACA ACCATCCGGC CGAGGAGATC
GCCAAGTTCC TCGACTTCAC GACCGAACTC GGCGTCGGCG TCTCGATGTC ACCGGGCTAC
GCTTATGAGC GTGCGCCCGA TCAGGAGCAC TTCCTGAACC GGACCAAGAC GAAGAAACTG
TTCCGCGACG TTTTCGCGCT CGGCAAGGGC AAGAAGTGGA ACTTCATGCA TTCCGGCCTG
TTTCTGGACT TCCTTGCCGG AAATCAGGAG TTCGAATGCA CCCCGTGGGG AATGCCCGCG
CGCAATATCT TCGGCTGGCA GAAGCCGTGC TACCTGCTCG GTGAAGGCTA CACCAAGACC
TTCAAGGAGC TGATGGAGAC CACCAACTGG GATTCCTACG GCACCGGCAA GTACGAGAAG
TGCGCGGACT GCATGGCGCA TTGCGGCTAC GAGCCGACCG CGGCGACGGC GTCGCTGAAC
AATCCGCTGA AGGCGGCCTG GGTCGCGTTG CGCGGGATCC GGACCTCGGG TCCGATGGCG
CCCGAGATCG ATCTGTCGAA CCAGCGTCCG GCTCAGTACA TCTTCGCCGA GCAGGTGCAG
AAGACGCTGT CAGAGATCCG CCGCGACGAG GCTGCCGCTG CCAATCACGG CGCCAAGCAC
GAAGCTTCGA CAGCCGCGTA G
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| Protein sequence | MAIPFHKEIR IGGYLLKQKL LGRKHYPLVL MLEPLFRCNL ACVGCGKIDY PDAILNRRMS
AQECWDAAEE CGAPMVAIPG GEPLIHKEIG EIVRGLVARK KFVSLCTNAL LLEKKLHLFE
PSPFLFFSVH LDGLKDHHDK AVSQAGVFDR AVSAIKAAKA KGFTVNVNAT IFDNHPAEEI
AKFLDFTTEL GVGVSMSPGY AYERAPDQEH FLNRTKTKKL FRDVFALGKG KKWNFMHSGL
FLDFLAGNQE FECTPWGMPA RNIFGWQKPC YLLGEGYTKT FKELMETTNW DSYGTGKYEK
CADCMAHCGY EPTAATASLN NPLKAAWVAL RGIRTSGPMA PEIDLSNQRP AQYIFAEQVQ
KTLSEIRRDE AAAANHGAKH EASTAA
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