| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3569 |
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| Symbol | |
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| ID | 4024083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3972036 |
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| End bp | 3974642 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963773 |
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| Product | hypothetical protein |
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| Protein accession | YP_570693 |
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| Protein GI | 91978034 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4258] Predicted exporter |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAAAA GTGCCGTCGT TTCCGTTGTC AAAGCCAGCA CCCGCTTTGC GTCTATTACT
GTGCTGATCG GAGTAATTCT CGCGATCGCC AGCGGCTTCT ATACTTTCAA ACACTTCGCG
ATCAACACCG ATATCAGTCA TTTGATCTCG TCTGATCTCG ATTGGCGTAA ACGCGATATT
GCGTTCGAAA AGGCGTTTGA TCAGGAAAGA TTGATCCTGG CGGTGGTCGA GGCCCCCACG
CCGGAATTCG CGAATGCCGC CGCGGCGGCG TTGACCGAGA AATTATCGAG CAATAGCAAT
AACTTCGACT CGGTCAAACG GCTCGGCGGC GGAGCTTTCT TCGACAAGCA CGGGCTGTTG
TTCCTGCCGA CCGAAGAACT CGCCAAGGTG ACGAGCCAGT TCCAGTCGGC GGTTCCCCTG
ATCGAAATCA TGGCCGGCGA CCCCAGCATC CGCGGCCTGA CCGGCGCGCT GGAGACCGGG
CTGGCCGGGG TGAAGCGCGG CCAGGTCACG CTCGAGGGCG CCGCGGCGCC GTTCAACACC
ATCAGCCAGA CCGTCGAGGA CGTCCTTGCC AAGCGCAATG CGTTCTTCTC CTGGCGCGGG
CTGACCAGCC CCGAGCCGCT GACCGACGGC GACAAGCGGG CGTTCATCGA GATCAAGCCG
ATTCTCGACT TCAAGGAGCT CGAGCCGGGC AGGGCCGCCA CCGACGCGAT TCGGGCGGCT
GCGGTCGACC TCAAGCTCGA GCAGCAATTC GGCGCCCGGG TGCGGTTGAC CGGCCCGGTG
GCGATCGCCA ACGAGGAGTT CTCCACGGTC AAGGAGGGTG CCATCGTTAA CGGCATCGGC
ACCGTCGTGG TGGTGCTGTT CATTCTGTGG ATGGCGCTGC ACTCGTCCAA GATCATCTTC
GCGGTCGCCG CCAACCTGTT CGTCGGCCTT GCGATCACGA CCGCCGTCGG ACTGCTTCTG
GTCGATTCGC TCAACCTGCT GTCGATCGCC TTCGCCGTCT TGTTCGTCGG CCTCGGCGTG
GATTTCGGCA TCCAGTACAG CGTCCGGTAC CGGTCCGAAC GCTTCAAGAC CAACGATCTC
GACAAGGCGC TGGTGCAGGC TGCGGAATAC TCCGCGGTGC CGCTGTCGCT GGCGGCGATG
TCCACCGCCG CCGGCTTCCT GTCGTTCCTG CCGACTTCCT ACCGGGGCAT TTCCGAGCTT
GGCGAGATCG CCGGCGCCGG CATGGTGGTG GCGTTCCTGT CGAGCATCAC GGTGCTGCCG
GCGCTGATCA AGCTGCTCAA CCCGGCCGGC GAAAAGGAGC CGCTGGGCTA CGCCTTCCTG
GCGCCGCTCG ACCGCTTTTT GGAAGATCAC CGCATCGGCA TCATCGCCGG CACGATCGGC
GTCGCGCTGG CCGGCCTGCC GCTGCTCTAC TTCATGCATT TCGACTTCAA CCCGATCAAT
CTGCGCAATC CGAAGGTCGA GTCGATCGCC ACCTTCCTCG ACCTGCGCCG GGACCCGAAC
ACGGGCGCCA ACGCCGTCAA CGTGATGGCG CCCTCGGAGC AAGCGGCCAA GGAGGTCGAG
GCCAGGCTCT CGAAGCTGCC GGAGGTCTCG CGGACATTGT CGCTCGACAC TTTCGTGCCC
GGCGACCAGC CGGCGAAGCT GAAGCTGATC CAGGCCGGCG CCAAGGTGCT TCAGCCGGCG
CTCAACCCCG ATCAGATCGA CGCCCCGCCG ACCGATCAGG AGAACGCCGA GGCGCTGAAC
GGCTCGGCCG AGGCCCTGCG CAAGGTCGCC GGCGAAGCCA GCGGCCCGGG TCCCGACGCC
GCGCGTCGCC TGGCCGTGGC CCTGAGTTCG CTCGCCGGCG CCGATCAGGC CACGCGTGAC
AAGGCGCAGG ATGTGTTCGT CAGGCCGCTG AAGCTCGCCT TCGACCAGCT TCGCAGCATG
TTGCAGGCCC AACAGGTGAC GCTGGCCAAT CTGCCCGAGG ACATCGTGTC GTCGTGGAAG
ACCAAGGATG GTCAGCTCCG CGTCGAGGCG CTGCCGAAGG GCGATCCGAA CGACAACGAC
ACGCTGCGCA AATTCGCCGC TGCGGTGCTT CAGGCCGAGC CGAATGCGAT CGGCGGGCCG
GTATCGATCC TGAAGTCCGG CGATACCATC GTGGCGTCGT TCATTCAGGC GGGCCTGTGG
GCGCTGCTAT CGATCTCGCT GCTGCTGTGG ATCACGCTGC GGCGGATCAC CGACGTCCTG
CTGACGCTGG TTCCGCTGCT GGTGGCCGGC GCGGTGACGC TCGAAATCTG CGTGCTGATC
GGCCTGCCGC TCAACTTCGC CAACATCGTC GCGCTGCCGC TGCTGCTCGG CGTCGGCGTC
GCGTTCAAGA TCTACTACGT CACCGCATGG CGGTCGGGGC GGACCAACCT GCTGCAATCG
GCGCTGACGC GGGCGATCTT CTTCAGCGCG CTGACCACGG CGACCGCGTT CGGCAGCCTA
TGGCTGTCGA GCCATCCCGG CACGGCCAGC ATGGGCAAGC TGCTGGCGCT GTCGCTGCTG
ACCACGCTGG CCGCGGTGCT GCTGTTCCAG CCGGCGCTGA TGGGCAAACC GCGCCACATC
GACGAGACCG GAGATACCGA TCATTAA
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| Protein sequence | MLKSAVVSVV KASTRFASIT VLIGVILAIA SGFYTFKHFA INTDISHLIS SDLDWRKRDI
AFEKAFDQER LILAVVEAPT PEFANAAAAA LTEKLSSNSN NFDSVKRLGG GAFFDKHGLL
FLPTEELAKV TSQFQSAVPL IEIMAGDPSI RGLTGALETG LAGVKRGQVT LEGAAAPFNT
ISQTVEDVLA KRNAFFSWRG LTSPEPLTDG DKRAFIEIKP ILDFKELEPG RAATDAIRAA
AVDLKLEQQF GARVRLTGPV AIANEEFSTV KEGAIVNGIG TVVVVLFILW MALHSSKIIF
AVAANLFVGL AITTAVGLLL VDSLNLLSIA FAVLFVGLGV DFGIQYSVRY RSERFKTNDL
DKALVQAAEY SAVPLSLAAM STAAGFLSFL PTSYRGISEL GEIAGAGMVV AFLSSITVLP
ALIKLLNPAG EKEPLGYAFL APLDRFLEDH RIGIIAGTIG VALAGLPLLY FMHFDFNPIN
LRNPKVESIA TFLDLRRDPN TGANAVNVMA PSEQAAKEVE ARLSKLPEVS RTLSLDTFVP
GDQPAKLKLI QAGAKVLQPA LNPDQIDAPP TDQENAEALN GSAEALRKVA GEASGPGPDA
ARRLAVALSS LAGADQATRD KAQDVFVRPL KLAFDQLRSM LQAQQVTLAN LPEDIVSSWK
TKDGQLRVEA LPKGDPNDND TLRKFAAAVL QAEPNAIGGP VSILKSGDTI VASFIQAGLW
ALLSISLLLW ITLRRITDVL LTLVPLLVAG AVTLEICVLI GLPLNFANIV ALPLLLGVGV
AFKIYYVTAW RSGRTNLLQS ALTRAIFFSA LTTATAFGSL WLSSHPGTAS MGKLLALSLL
TTLAAVLLFQ PALMGKPRHI DETGDTDH
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