Gene RPD_3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3567 
Symbol 
ID4024081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3969220 
End bp3970074 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content65% 
IMG OID637963771 
Producthypothetical protein 
Protein accessionYP_570691 
Protein GI91978032 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.920255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCG GAATGTCACT CAAATCATTG GTCGTCTTCG TCGAGTCGAC GGATGCCTGC 
GAGGCGCGCA TTCGCTATGC CGCGCGGCTG GCGCTGCGGC ACGACGCGCA TCTGATCGGC
GCTTTCGTCC TGAAGAACGC GTGGCGTAAC GATCGCTCCG ATGGCTTCAT CCAGGGTGGC
GGCGCGATCC GGGAGATGTT GGAACGCCAC GGCCTCGCTG AGCGCAAGGC GCTGCAGGAC
GCGACGCAAC GCTTCGAGGC ATTGGCCGGA CGGGAGAATT CTTCATTCGA ATTTCGCGTG
CTTCGCGACG ACGACATCGG CAATCTCGCG CGGCTGCATT GTCTGCATAC GGATCTGGTC
GTGGTGGGCC ATCCCGCGCC GGGAGGGTTG CCGTCGACAT GGTTGCCGGA GCAGATGCTG
CTCTCGGCCG GCGTTCCGCT TCTTATCGTT CCGCAAGGCT GGTCCGACGG ACCGATCGCG
AACAACGTGC TGTTGGCCTG GAACGCGAGT CGCGAAGCGC GGCGCGCGAT CACCGATTCG
CTGCCGATCC TGAAGGCGGC GGACTCGGTG GCGGTCGTCG TCGTCGACGC CGAAAAGAAC
CCGCTGCATG GTCATGAGCC CGGCGCGGAT ATCGCGCATC TTCTGAGCCG CCACGGCGTC
GCGGTGCGCG TCGAACAATT GCAATCCAAG GGGACGTCGG TCGCGGACAC GATCCGCCGC
TTCGCCGCCG AAGATCAGTC GGACCTGATC GTGCTCGGCG CCTATGGCCA CTCCCGCCGC
CGCGAACTGC TGTTCGGCGG CGTGACGCAG TCATTGTTGA GCACGGTCAC CGTCCCGACG
CTGATCGCGC ATTGA
 
Protein sequence
MASGMSLKSL VVFVESTDAC EARIRYAARL ALRHDAHLIG AFVLKNAWRN DRSDGFIQGG 
GAIREMLERH GLAERKALQD ATQRFEALAG RENSSFEFRV LRDDDIGNLA RLHCLHTDLV
VVGHPAPGGL PSTWLPEQML LSAGVPLLIV PQGWSDGPIA NNVLLAWNAS REARRAITDS
LPILKAADSV AVVVVDAEKN PLHGHEPGAD IAHLLSRHGV AVRVEQLQSK GTSVADTIRR
FAAEDQSDLI VLGAYGHSRR RELLFGGVTQ SLLSTVTVPT LIAH