Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3567 |
Symbol | |
ID | 4024081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3969220 |
End bp | 3970074 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637963771 |
Product | hypothetical protein |
Protein accession | YP_570691 |
Protein GI | 91978032 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.920255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAGCG GAATGTCACT CAAATCATTG GTCGTCTTCG TCGAGTCGAC GGATGCCTGC GAGGCGCGCA TTCGCTATGC CGCGCGGCTG GCGCTGCGGC ACGACGCGCA TCTGATCGGC GCTTTCGTCC TGAAGAACGC GTGGCGTAAC GATCGCTCCG ATGGCTTCAT CCAGGGTGGC GGCGCGATCC GGGAGATGTT GGAACGCCAC GGCCTCGCTG AGCGCAAGGC GCTGCAGGAC GCGACGCAAC GCTTCGAGGC ATTGGCCGGA CGGGAGAATT CTTCATTCGA ATTTCGCGTG CTTCGCGACG ACGACATCGG CAATCTCGCG CGGCTGCATT GTCTGCATAC GGATCTGGTC GTGGTGGGCC ATCCCGCGCC GGGAGGGTTG CCGTCGACAT GGTTGCCGGA GCAGATGCTG CTCTCGGCCG GCGTTCCGCT TCTTATCGTT CCGCAAGGCT GGTCCGACGG ACCGATCGCG AACAACGTGC TGTTGGCCTG GAACGCGAGT CGCGAAGCGC GGCGCGCGAT CACCGATTCG CTGCCGATCC TGAAGGCGGC GGACTCGGTG GCGGTCGTCG TCGTCGACGC CGAAAAGAAC CCGCTGCATG GTCATGAGCC CGGCGCGGAT ATCGCGCATC TTCTGAGCCG CCACGGCGTC GCGGTGCGCG TCGAACAATT GCAATCCAAG GGGACGTCGG TCGCGGACAC GATCCGCCGC TTCGCCGCCG AAGATCAGTC GGACCTGATC GTGCTCGGCG CCTATGGCCA CTCCCGCCGC CGCGAACTGC TGTTCGGCGG CGTGACGCAG TCATTGTTGA GCACGGTCAC CGTCCCGACG CTGATCGCGC ATTGA
|
Protein sequence | MASGMSLKSL VVFVESTDAC EARIRYAARL ALRHDAHLIG AFVLKNAWRN DRSDGFIQGG GAIREMLERH GLAERKALQD ATQRFEALAG RENSSFEFRV LRDDDIGNLA RLHCLHTDLV VVGHPAPGGL PSTWLPEQML LSAGVPLLIV PQGWSDGPIA NNVLLAWNAS REARRAITDS LPILKAADSV AVVVVDAEKN PLHGHEPGAD IAHLLSRHGV AVRVEQLQSK GTSVADTIRR FAAEDQSDLI VLGAYGHSRR RELLFGGVTQ SLLSTVTVPT LIAH
|
| |