| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3566 |
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| Symbol | |
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| ID | 4024080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3967408 |
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| End bp | 3969027 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963770 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_570690 |
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| Protein GI | 91978031 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGC AGGTCGAGGG TGAATTCGAC TACATCGTGG TCGGCGCAGG CACCGCCGGC
TGCATCGTCG CCAACCGGCT GTCGGCCGAC CCGAACTGCC GGGTGCTGCT GCTCGAAGCC
GGCGGCCGCG ACAACTGGAT CTGGTTTCAC ATCCCGGTCG GCTATCTGTT CGCGATCGGC
AATCCGCGCT CGGACTGGAT GTTCAAGACC GAGCCGGAGC CCGGCCTCAA TGGTCGGTCA
TTGGCCTATC CGCGCGGCAA GGTGATTGGC GGCTCCTCGG CGATCAACGC GATGATCTCG
ATGCGCGGCC AGGCCGCCGA CTATGATCAC TGGCGCCAGC TCGGCATGAG CGGCTGGGGC
TGGGACGACG TCCGGCAGGT GTTCCGGCGG CTGGAGGATC ATTTCCTCGG CGACAGCGAG
CATCATGGCG CCGGCGGCGG CTGGCGGATC GAGGCGGCGC GGCTGTCCTG GCCGATCCTC
GACGCGGTCG CCAACGCCGC CGGCGAGATG GGCATCCCGC GCAGCGCCGA TTTCAACACC
GGCGACAATG AGGGCGTCGG CTATTTCCAT GTCAACCAGA AGCGCGGCCG GCGCTGGTCG
TCGGCGCGCG GCTTCCTCAA GCCGGCGCTG CACCGGCGAA ACCTCCGGGT CGAGACCGAC
GTCCTGACCG ACCGCGTGCT CGTCGAGAAC GGCCGCGTGG CCGGCGTGCG CTTCCTGCAT
AACGGTGTCA CCGTCGAGGC CCGCGCGCGG CGCGAGGTGG TGCTGTGCGC CGGCTCGATC
GGTTCGATCC AGGTGCTGCA GCGCTCCGGT ATTGGCCCGG CGGAATGGTT GACGCCGCTC
GGCATCGCGC CGGTGCTCGA CCGTCCCGGC ATCGGCCGCA ATCTGCAGGA CCATCTGCAA
CAGCGCGCGA TCTACCGGGT CACCGGCGGC CGCACGCTGA ACGAGATCTA TCACTCGCTG
CCGCGGCGCG CCTGGATGGG CCTCGACTAC GCGCTGCGTC GGCGCGGCCC GCTGACGATG
GCGCCGTCGC AGCTCGGCAT CTTTACCCGC TCCGATCCGC ATCAGGAGCG CGCCAACATC
CAGTTCCACG TCCAGCCGCT GTCGCTCGAC AAATTCGGCG ACCCGCTCCA CCGCTTCCCG
GCGATCACCG TCAGCGCCTG CAATTTGCGT CCGACATCGC GCGGCGAGAT CAGGATCAAG
TCCACCGCGC TCGACGCAGC GCCCTCGATC GCGCCGCATT ATCTCGAAAC CGACGAGGAC
CGCCGCGTCG CCGCGGATGC GATCCGCACC ACGCGCCGGC TGATGCGGCA ACAGGCGCTG
GCGCAGTTTC AGCCGGAGGA GTATCTGCCC GGCCGCGCCG TCGGCGACGA CGACGCGTCG
CTGGCGAAAG CCGCGGGCGA CATCGGCACC ACGATCTTCC ACCCCGTCGG CACCGCGAAG
ATGGGGCTCG AAAGCGATCC GATGGCCGTG GTCGACGAAC GGCTGCGGCT GCACGGCCTT
CAAGGCCTGC GCGTCGTCGA CGCCTCGGTG ATGCCGACGA TCACGTCAGG CAACACCAAC
ACCCCGACCG CGATGATCGC CGAAAAAGGC GCGCAGATGA TCGTGGAAGA CGGCAAGTAA
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| Protein sequence | MTAQVEGEFD YIVVGAGTAG CIVANRLSAD PNCRVLLLEA GGRDNWIWFH IPVGYLFAIG
NPRSDWMFKT EPEPGLNGRS LAYPRGKVIG GSSAINAMIS MRGQAADYDH WRQLGMSGWG
WDDVRQVFRR LEDHFLGDSE HHGAGGGWRI EAARLSWPIL DAVANAAGEM GIPRSADFNT
GDNEGVGYFH VNQKRGRRWS SARGFLKPAL HRRNLRVETD VLTDRVLVEN GRVAGVRFLH
NGVTVEARAR REVVLCAGSI GSIQVLQRSG IGPAEWLTPL GIAPVLDRPG IGRNLQDHLQ
QRAIYRVTGG RTLNEIYHSL PRRAWMGLDY ALRRRGPLTM APSQLGIFTR SDPHQERANI
QFHVQPLSLD KFGDPLHRFP AITVSACNLR PTSRGEIRIK STALDAAPSI APHYLETDED
RRVAADAIRT TRRLMRQQAL AQFQPEEYLP GRAVGDDDAS LAKAAGDIGT TIFHPVGTAK
MGLESDPMAV VDERLRLHGL QGLRVVDASV MPTITSGNTN TPTAMIAEKG AQMIVEDGK
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