| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3559 |
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| Symbol | |
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| ID | 4024073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3957460 |
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| End bp | 3958716 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963763 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_570683 |
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| Protein GI | 91978024 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0888701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGACC CACCAATGCT TTTCTGCTTT TCGCGTCGCG CGCTGTTGTT CGCGACGCTC
GCCACACTTT CCGCCGTAGC CCCCATTGCC GTTGCGCCGC CGGCGCTGGC GCAGAAGACC
TACGACCCAG GCGCCAGTGA CAGCGCGATC CGGATCGGAA ATCTGATGCC CTATTCGGGA
CCCGCCTCCG CTTACGCCAT CGTCGGCCGG ATCGAGCAGG CCTATTTCAG GATGATCAAC
GACCAGGGCG GCATCAACGG CCGCAAGATC GAGTTCATTT CCTATGACGA CGCCTACAGC
CCGGCGAAGG CGGTCGAGCA GACCCGCAAG CTGGTCGAGA GCGACGAGGT GCTGCTGGTA
TTCAGCGCGA TGGGCACGCC CTCGAACGCC GCGATCCAGA AATATCTTAA TGCCAAGCAA
GTGCCGCAAT TATTCGCCGC CAGCGGCGCG ACGCGGTTCG GCGAGCCCAA GGCGTTCCCC
TGGACGATGG GCTGGCAACC GCCCTATCAG GTCGAAGGCC GGGTCTACGC CAAGCATATT
CTGGCGACCA AGCCCGAAGC CCGCATCGCG GTGCTGTATC AGAACGATGA TCTCGGCCGC
GATCTGCTGA AGGGCCTGAA GGATGGGCTC GGCGAACAGG CATCGCGGAT CATCGCCGAG
GAAAGCTATG AGGTGACCGA GCCCTCCGCC GACAATCACA TCGCGCGGTT GAAAGCCTCG
GGCGCCGATG TGTTCGTCAG CATCACCACG CCGCGGTTCG CTGCGCAGAG CATCCGCAAG
GCCGCCGAGA TGGCGTGGCG TCCGCTCTAT GTGCAGGCGC TGGTGTCGGC CTCGATCGGC
GCGGTGATCC GGCCCGCCGG CATCGAGAAC GCGCAGGGAC TGGTCTCCGC GGCCTACAAC
AAGGACGCCG CCGATCCGCA ATGGATCGGC GATCCCGGCA TCAAGCGGTT CCACGCCTTC
CTCGATGCCT ACGCCCCGGA CGTCAATCGC GGCGACAATT CGGTGGTCTA CGGATACGGT
GCGGCGCAAT GCCTCGTCGA AGTGCTGCGC CGCGCGGGCG ACACGCTGAC GCGCGCCAAT
GTGATGCGCG AGGCCGCCAA CCTCAAAGGC TACGCGCCCG ACACGCTGCT GCCGGGCATC
GCCATCACCA CCGCACCCGA CGATTTTCAC CCGATCGAAC AGCTGCGCAT GATGCGCTTC
GAAGGCGACC ACTGGCAATT GTTCGGGCCG GTGATCGACG CGCAGCTGCG CAACTAA
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| Protein sequence | MRDPPMLFCF SRRALLFATL ATLSAVAPIA VAPPALAQKT YDPGASDSAI RIGNLMPYSG
PASAYAIVGR IEQAYFRMIN DQGGINGRKI EFISYDDAYS PAKAVEQTRK LVESDEVLLV
FSAMGTPSNA AIQKYLNAKQ VPQLFAASGA TRFGEPKAFP WTMGWQPPYQ VEGRVYAKHI
LATKPEARIA VLYQNDDLGR DLLKGLKDGL GEQASRIIAE ESYEVTEPSA DNHIARLKAS
GADVFVSITT PRFAAQSIRK AAEMAWRPLY VQALVSASIG AVIRPAGIEN AQGLVSAAYN
KDAADPQWIG DPGIKRFHAF LDAYAPDVNR GDNSVVYGYG AAQCLVEVLR RAGDTLTRAN
VMREAANLKG YAPDTLLPGI AITTAPDDFH PIEQLRMMRF EGDHWQLFGP VIDAQLRN
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