| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3553 |
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| Symbol | |
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| ID | 4024067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3950655 |
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| End bp | 3952754 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963757 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_570677 |
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| Protein GI | 91978018 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.933937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG TCGTCACGCG CGAGCGGCAT GATGTGATTG CGGTCGTCAC TGTCGACAGC
CCGCCGGTCA ACGCGCTGAG TGCGGCTGTT CGCCGCGGCA TTTTGGACAA CGTCAACGCC
GCCGTCGCCG ATCCGGAAGT ACAGGCGATC GTGTTGACCT GTGCGGGGCG CACCTTCATC
GCCGGCGCCG ATATCACCGA ATTCGGCAAG CCGGCGCAGC CGCCGAGCCT CAACGACGTC
ATCGCCGCGC TGGAGAATTC GCCGAAGCCG ACGATCGCCG CGATCCACGG CACCGCGCTG
GGCGGCGGTC TTGAGGTCGC GCTGGGTTGC CATTTCCGCG TGGCGGTCAA GGACGCCAGG
CTCGGCCTGC CGGAGGTGAA ACTCGGCCTG CTGCCCGGCG CTGGCGGAAC CCAGCGGCTG
CCGCGCGCGG TCGGTCCCGA ACTCGCAGTG CAGATGATCG TCGGCGGCAA TCCGATCGGC
GCCGCTGATG CGTTGAAGCA CGGGTTGATC GAGGAGGTCG TCGAGGACCG CGTCGCCGGC
GGCGTAGCCT TCGCGCGAAA GGTGCTGGCC GAGAAGCGTC CGACGCGCCG GCTGCGCGAC
GACGACAGCA AGCTCGCTGC CGCCCGAGCC GATCGTTCGA TCTTCACCAA TGCGGTCGCG
TCGATGACCA AGAAGGCGAG GGGCCTCGAG GCGCCGTTCG CCTGTGCCGA TGCGATCGGC
GCAGCGATCG ACCTGCCGTT CGAGCAGGGT CTGGCGAAGG AGCGCGAGGG GTTCCTCAAG
CTCGTGGTCA GCGATCAGTC GAAGGCGCAG CGCTACGCGT TCTTCGCCGA GCGCGAAGCC
GCCAAGGTCG ACGGCGTGCC GGACGGCGCC AAGCCGCGTC CGGTGGCGCG CGTCGCGATC
ATCGGCGCCG GCACGATGGG CGGCGGCATC GCGATGTCGT TCGCCAATGC CGGCATTCCG
GTGACCCTGA TCGAGACCGG CAAGGAACAG CTCGATCGCG GCATGGGCAT CATGCAGAAG
AACTACGAAG CCACGGCGGC GCGCGGCGGC ATCCCGGCCG ACGCGCCGGC GAAGCGCATG
GGTCTGATCA CCGGCGTTGT CGGCCTCGAG AACGTCAAGG ACGCCGATCT GATCATCGAG
GCGGTGTTCG AGACGATGGC GGTGAAGAAG GAAGTCTTCA CCGCGCTCGA CGCCTACGCC
AAGCCCGGTG CGGTGCTCGC TTCCAACACC TCCTATCTCA ATGTCGACGA GATCGCCGCG
ACCACCAAGC GTCCGCAGGA CGTGCTCGGG ATGCACTTCT TCTCGCCGGC CAATGTGATG
AAGCTTTGCG AAATCGTCCG CGGCGCCAAG ACCGCGCCGG ACGCGCTGCT CACGGCGGTG
TCGATCGCCA AGAAGATCGC CAAGGTGCCT GTGGTGGCCG GCGTTTGCGA CGGCTTCATC
GGCAACCGGA TGCTCGCGGC CCGCAGCAAG CAGTCCGAGA AGCTATTGTT CGAGGGCGCG
CTGCCGCAGC AGGTCGACGC CGTCGTCACC AAATTCGGGA TGCCGATGGG CCCGTTCGCG
ATGGGCGATC TCGCCGGCCT CGACATCGGC TGGCGCTCGC GCCAGGACCG CGGCATCAAG
TCGGAAATCG CGGATGCGCT GTGCGAGGCG GGCCGCTTCG GCCAGAAGAC CGGCAAGGGC
TACTACAAAT ACGAGCAGGG ATCGCGCTCG CCGCTGCCGG ATCCCGAGGT CGAGACCCTG
ATCAACGACA CGCTGACCAA GCTCGGCCTG AAGCGCCGCG AGGTCAGCGA CGAGGAAATC
CTCGAACGCA TGGTCTATCC GATGATCAAC GAGGGCGCGC GTATCCTCGA GGAGAAGATC
GCGGCGCGGC CGAGCGACAT CGACGTGGTC TGGCTTTACG GCTACGGCTG GCCGATCTAT
CGCGGCGGCC CAATGCACTA CGCCGACTCG GTCGGCCTGA AGCACATCGC CGAGCGCCTT
GCATTCTACG CCAAGGCCAC CAACGATCCG TCGCTTGAGC CGGCGCCGCT GCTGAAGCGT
CTCGCCGAGG AGGGCAAGAC CTTCGCGTCG CTGGCGCAGC AGTCCAAGGC GGCGGCGTGA
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| Protein sequence | MSEVVTRERH DVIAVVTVDS PPVNALSAAV RRGILDNVNA AVADPEVQAI VLTCAGRTFI
AGADITEFGK PAQPPSLNDV IAALENSPKP TIAAIHGTAL GGGLEVALGC HFRVAVKDAR
LGLPEVKLGL LPGAGGTQRL PRAVGPELAV QMIVGGNPIG AADALKHGLI EEVVEDRVAG
GVAFARKVLA EKRPTRRLRD DDSKLAAARA DRSIFTNAVA SMTKKARGLE APFACADAIG
AAIDLPFEQG LAKEREGFLK LVVSDQSKAQ RYAFFAEREA AKVDGVPDGA KPRPVARVAI
IGAGTMGGGI AMSFANAGIP VTLIETGKEQ LDRGMGIMQK NYEATAARGG IPADAPAKRM
GLITGVVGLE NVKDADLIIE AVFETMAVKK EVFTALDAYA KPGAVLASNT SYLNVDEIAA
TTKRPQDVLG MHFFSPANVM KLCEIVRGAK TAPDALLTAV SIAKKIAKVP VVAGVCDGFI
GNRMLAARSK QSEKLLFEGA LPQQVDAVVT KFGMPMGPFA MGDLAGLDIG WRSRQDRGIK
SEIADALCEA GRFGQKTGKG YYKYEQGSRS PLPDPEVETL INDTLTKLGL KRREVSDEEI
LERMVYPMIN EGARILEEKI AARPSDIDVV WLYGYGWPIY RGGPMHYADS VGLKHIAERL
AFYAKATNDP SLEPAPLLKR LAEEGKTFAS LAQQSKAAA
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