| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3530 |
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| Symbol | |
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| ID | 4024044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3918634 |
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| End bp | 3920271 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963734 |
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| Product | ABC transporter related |
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| Protein accession | YP_570654 |
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| Protein GI | 91977995 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.463612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCC TCAACCAGCC CTTGCTCTCC GTCGCCGATC TCTCCGTTGC CTTCCATCAG
CAGAGCGGCA CCACGCTCGC GGTGGATCGC ATCTCGTATC AGATCAGGCG CGGCGAGTGC
GTGGCATTGG TCGGCGAGTC CGGGTCGGGC AAATCGGTCA GCGCGCTGTC GATCCTGAAG
TTGCTGCCGT ATCCGACCGC GTCGCATCCG AGCGGGCAGA TCCGGTTCAA GGGCCGCGAA
CTGCTCGGCA TGTCGGAGAA CGACATCCGC GCTATCCGCG GCAACGAGAT CTCGATCATC
TTCCAGGAGC CGATGACCTC GCTCAATCCG CTGCACACGA TCGAGGCGCA GATCGGCGAG
ATCCTGCAAC TGCACGGCGG CCCGCGCGGC ACCAAGGGGC GGGCGCGCAT TCTGGAATTG
CTGACGCAGG TCGGCATCCC CGAGCCGGAG ACGCGGCTCG CCAGCTATCC GCACCAATTG
TCCGGCGGCC AGCGCCAGCG CGTGATGATC GCGATGGCGC TCGCCAACGA GCCTGATCTC
TTGATCGCCG ACGAGCCGAC CACCGCGCTC GACGTCACCG TGCAGGCGCA GATCCTGGCG
CTGCTCGCCG ACATCCGCGC CCGGCTCGGC ATGAGCCTAT TGTTCATCAC CCACGATCTC
GGCATCGTGC GGCGCATCGC CGACGTCGTC TGCGTGATGA ACAACGGCAA GATCGTCGAG
CAGGGGCCGG TCGAGCAGGT GTTCACCGCG CCGACCCACG CCTACACCAA GGCGCTGCTC
GCCGCTGAGC CGAAGCCGGA TCCGGCGCCG CCACGGCCGG ACGCGCCGGT GGTGATCTCC
ACCGACGATC TGAAAGTCTG GTTTCCGATC AAGCGCGGCC TGATGCGCAA GACGGTGGGC
CACATCAAGG CGGTCGACGG TGTCACGCTC GCGGTGCGCA AGGGCGAAAC CCTCGGCGTC
GTCGGCGAGT CGGGCTCCGG CAAGACCACG CTCGGGCTGG CGCTGTTGCG GCTGATCTCG
TCTGAAGGTC CGATCGTGTT CCTCAGCAGC AACATTCAGG GCCTGAAGTT CAAGGAGATG
CTGCCGTTCC GCCGCGACAT GCAGATCGTG TTTCAGGATC CGTTCGGCGC GCTCAGCCCG
CGCATGTCGG TCGGCGATAT CATCGCCGAG GGTCTCAGCG TGCATCAGCC GCATCTGTCG
GAAGAAGAGC GCGAGGCGAG GGTGATCAAG GCGCTGAAGG AGGTCGGTCT CGATCCGGCG
ACGCGCTTCC GCTATCCGCA CGAATTCTCC GGCGGCCAGC GCCAGCGCAT CAGCATCGCG
CGTGCGGTGG TGCTGGAGCC GAATTTCGTC GTGCTCGACG AGCCGACCAG CGCGCTCGAC
ATGTTGTTTC AGGCGCAGAT GGTCGACCTG TTGCGCGAGC TGCAGCGCAA GCGCGATCTT
ACTTACATGT TCATCTCGCA CGATTTGCGG GTCGTCGCGT CACTCGCAAG TCATCTGATC
GTGATGAAAC AGGGCAAGGT CGTGGAGGAA GGCCCAGCGG CGGAGCTGTT CAAGCACCCG
AAGACGGACT ATACGCGGGC GCTGTTTGCC GCCGCGTTCC GGCTCGAAAC CGCTCCGGGC
GGCGCCGCCG CGCAATAG
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| Protein sequence | MDALNQPLLS VADLSVAFHQ QSGTTLAVDR ISYQIRRGEC VALVGESGSG KSVSALSILK
LLPYPTASHP SGQIRFKGRE LLGMSENDIR AIRGNEISII FQEPMTSLNP LHTIEAQIGE
ILQLHGGPRG TKGRARILEL LTQVGIPEPE TRLASYPHQL SGGQRQRVMI AMALANEPDL
LIADEPTTAL DVTVQAQILA LLADIRARLG MSLLFITHDL GIVRRIADVV CVMNNGKIVE
QGPVEQVFTA PTHAYTKALL AAEPKPDPAP PRPDAPVVIS TDDLKVWFPI KRGLMRKTVG
HIKAVDGVTL AVRKGETLGV VGESGSGKTT LGLALLRLIS SEGPIVFLSS NIQGLKFKEM
LPFRRDMQIV FQDPFGALSP RMSVGDIIAE GLSVHQPHLS EEEREARVIK ALKEVGLDPA
TRFRYPHEFS GGQRQRISIA RAVVLEPNFV VLDEPTSALD MLFQAQMVDL LRELQRKRDL
TYMFISHDLR VVASLASHLI VMKQGKVVEE GPAAELFKHP KTDYTRALFA AAFRLETAPG
GAAAQ
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