| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3526 |
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| Symbol | |
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| ID | 4024040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3914862 |
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| End bp | 3915707 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963730 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_570650 |
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| Protein GI | 91977991 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.476305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGAAGC CGTATTCGTT CGTTCCGGTC GGCTTCGTGA GTAAAGTTGC CATGCGCCAG
CTGTCTTGTC TCGCCCGGTT TCTCGCATCC GCGGCCGTGA CCACGGCCCT GGCGACGGCG
CTTGCCGGCT GCCAGACCGC GGGGATGTCC GGCATCACCG GCGCGCTCGG CGCGCGGGCC
GAGGCGCCGG CCGATCCGAA CCGCGTCGCC GAGATCGCCG GCGAGCGCTA TCGCGCCAAT
CCCAAGGATG CCGGCGCCGC TCTCGCTTAT GGCCAGGCGC TGCGCGCCAT CGGCCAGCGC
GCCCAGGCGG TGGCGATGCT GGAGAAGGCA TCGCTGGCCA ATCCCAGCAA CAAGACCGTG
CTCGCTGCCT ATGGCCGCGC GCTCGCCGAC AACGGCAATT TCAAAGCTGC GTTCGACACG
CTGACTCATG CGCATAGTCC GGACAACCCG GATTGGCGAA TTTTGTCGGT ACAGGGCACG
GCGCTCGATC AGCTCGGCCG CAGCGACGAA GCGCGGCGCT ATTACGCCAG CGCGTTGAAG
CTCGCGCCGG GCGAGCCTTC CGTGCTCTCC AATCTCGGCC TGTCCTACAT GCTCACCAAG
GAATTGCCGA AAGCGGAGGA GACGCTGCGG CAGGCCTATG CCAACGGTCG TGCCGATGCG
CGGGTGCGGC AGAATCTGGC GCTGGTGGTC GGATTGCAAG GCCGCTTCGC CGAGGCGGAA
AGCATCGTGC AGGCTGATCT CCCGCCGGAG GAGGCGGCCG CCAACGTCGC CTATCTCAAG
CAGATGCTGG ACGGCAAGAC CGACACCCGC GGTCGCGGCC GTGGCGTATT GGCCTCCGGC
CACTGA
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| Protein sequence | MLKPYSFVPV GFVSKVAMRQ LSCLARFLAS AAVTTALATA LAGCQTAGMS GITGALGARA
EAPADPNRVA EIAGERYRAN PKDAGAALAY GQALRAIGQR AQAVAMLEKA SLANPSNKTV
LAAYGRALAD NGNFKAAFDT LTHAHSPDNP DWRILSVQGT ALDQLGRSDE ARRYYASALK
LAPGEPSVLS NLGLSYMLTK ELPKAEETLR QAYANGRADA RVRQNLALVV GLQGRFAEAE
SIVQADLPPE EAAANVAYLK QMLDGKTDTR GRGRGVLASG H
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