| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3524 |
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| Symbol | |
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| ID | 4024038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3912805 |
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| End bp | 3913779 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963728 |
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| Product | type II secretion system protein |
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| Protein accession | YP_570648 |
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| Protein GI | 91977989 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGC AAGCGCTCTC GCTCGGGTTC TTTGCCGCCG TGGCCGTCGG GGGGCTGGCG
TGGGTTTTCC TCTATCCGAT GTTGTCCGGC GAAAAGCAGG CCGAAAAGCG TCGCTCGTCG
GTCGCGCGCG TGACGCCCGC CGTGCGGCAG GTCGAAAGAA CGCAGCGCTC GCGCCGCGAG
CAGGTCGAAG GATCGCTGCG GGACATCGAG GCACGCAAAC AGAAGCAGAA GAACGTCGCA
CTGAGCACGC GGCTGACCCA GGCGGGGCTC GACTGGACAC CGAAGAAATT CATCACAATT
TCGGCGGTGC TCGGCGTGTT CGTGTTCGCC GTGACCATGC TGTTCGGCGG CGGACTGACG
GCGGCGGCGG GGCTCGCCTT CGCCGCCGGC TTCGGCCTGC CCCGCTGGAT GCTCGGCTTC
CTGAAGAAGC GTCGGGAAAA GCGATTCCTC AACGCCCTGC CCGACGCCGT CGACGTGATC
GTGCGCGGCA TCAAGGCCGG CCTGCCGCTG TTCGACTCGA TCAAGGTGGT GGCGGCGGAC
TCGCCTGAGC CTCTGAAGAC CGAGTTCAAC GCCATCATCG AGACCCAGAC GATCGGCATG
CCGATCGGCG AAGCCTGCGC GCGCCTCTAT GACCGGATGC CCGTGCCGGA GGCCAACTTC
TTCGGCATCG TCATCGCGAT CCAGCAGAAA TCCGGCGGCA ATCTGTCGGA AGCGCTCGGC
AATTTGTCGA AGGTGCTGCG CGATCGCAAG CGGATGGCCG AGAAAATCCA GGCGATGTCG
ATGGAGGCGA AGGCCTCGGC GGCGATCATC GGCTCGTTGC CGCCGATCGT GATGCTGCTG
GTCTACATGT CGACGCCCGA CTACATCGCG CTGCTGTGGA CACACCCGAC CGGCCGCCTG
ATGCTTGCCG GCTGCGTGGT GTGGATGGCG GCGGGAATTC TGGTGATGAA GAAGATGATC
AATTTCGACT TCTGA
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| Protein sequence | MQMQALSLGF FAAVAVGGLA WVFLYPMLSG EKQAEKRRSS VARVTPAVRQ VERTQRSRRE
QVEGSLRDIE ARKQKQKNVA LSTRLTQAGL DWTPKKFITI SAVLGVFVFA VTMLFGGGLT
AAAGLAFAAG FGLPRWMLGF LKKRREKRFL NALPDAVDVI VRGIKAGLPL FDSIKVVAAD
SPEPLKTEFN AIIETQTIGM PIGEACARLY DRMPVPEANF FGIVIAIQQK SGGNLSEALG
NLSKVLRDRK RMAEKIQAMS MEAKASAAII GSLPPIVMLL VYMSTPDYIA LLWTHPTGRL
MLAGCVVWMA AGILVMKKMI NFDF
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