| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3523 |
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| Symbol | |
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| ID | 4024037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3911342 |
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| End bp | 3912790 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963727 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_570647 |
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| Protein GI | 91977988 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.779224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGGTA AGCGTAGCGG TTCAGATCAA GAGGTCCGTA TTCCGAAGCC GGCCGGTCCG
GCTCCGGAGC CGGCGGCGCG CGCGCCCGAG CCCTCCGCGA AGGTGGCGTC GCCTCCGCTC
GCGCCGGCCC GCGCCGCGCC TCCGCCGATC GAGGCGCGCC GTTCCGATGT CTATTACCAG
GTCAAGGCGA CGATCTTCGG CGCACTGATC GAGGCGATCG ATCTGGCGCA GCTCGCCAAG
CTCGACGCTG AATCGGCGCG CGAGGAAATC CGCGACATCG TCAACGAAAT CATCGCGATC
AAGAACATCG TGATGTCGAT CGCCGAGCAG GAAGAGCTGC TCGACGACAT CTGCAACGAC
GTGCTCGGCT ATGGACCGCT CGAACCGCTG CTGTCGCGCG ACGACATCTC CGACATCATG
GTCAACGGGT CCGGCACGGT CTATATCGAA GTCGCGGGCC GGATCCAGCG CACCGGCATC
CGCTTCCGCG ACAACCAGCA GCTCCTCAAC ATCTGCCAGC GGATCGTCAG CCAGGTCGGC
CGGCGCGTCG ACGAATCCTC GCCGATCTGC GACGCTCGCC TCGCCGACGG CAGCCGCGTC
AACGCCATCG TTCCGCCGCT GGCGATCGAC GGCCCCGCAC TCACCATTCG TAAGTTCAAG
AAGGACAAGC TGACGCTCGA CCAACTGGTC AAGTTCGGCG CGATCACGCC GGAGGGAGCG
CAGATCCTGC AGATCATCGG CCGCTGCCGC GCCAACGTGC TGATCTCCGG CGGCACCGGC
TCCGGCAAGA CCACACTGCT GAACTGCCTC ACCCAGTATA TCGACGACGA CGAACGCATC
ATCACCTGCG AAGACGCGGC CGAACTGCAA CTGCAGCAGC CGCACGTGGT CCGCCTCGAA
ACCCGTCCGC CGAACATCGA AGGCGAAGGC CAGGTCACGA TGCGCGAACT GGTGCGCAAC
TGCCTGCGTA TGCGGCCGGA GCGGATCATC GTCGGCGAAG TCCGCGGACC CGAGGCGTTC
GACCTGTTGC AGGCGATGAA CACCGGCCAC GACGGCTCGA TGGGCACGCT GCACGCCAAC
AACCCGCGCG AGGCGCTGTC ACGATGCGAA TCGATGATCA CGATGGGCGG CTTCTCGCTG
CCGTCGCGCA CCATCCGCGA GATGATCTGC GCCTCGATCG ACGTGGTGAT CCAGGCCGCG
CGCCTGCGCG ACGGTTCGCG CCGCATCACC CACATCACCG AAGTGATCGG GATGGAAGGC
GACACCATCA TCACCCAGGA TCTGTTCATC TACGACATGG TCGGTGAGGA CGTGAACGGC
AACATCATCG GCCGCCATCG CTCAACCGGC ATCGGGCGCC CCAAATTCTG GGAGCGCGCG
CGTTACTACG GCGAGGAGAA GCGGCTCGCC GCGGCGCTCG ACGCCGCCGA AATCGAAGTC
GACGTCTAA
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| Protein sequence | MFGKRSGSDQ EVRIPKPAGP APEPAARAPE PSAKVASPPL APARAAPPPI EARRSDVYYQ
VKATIFGALI EAIDLAQLAK LDAESAREEI RDIVNEIIAI KNIVMSIAEQ EELLDDICND
VLGYGPLEPL LSRDDISDIM VNGSGTVYIE VAGRIQRTGI RFRDNQQLLN ICQRIVSQVG
RRVDESSPIC DARLADGSRV NAIVPPLAID GPALTIRKFK KDKLTLDQLV KFGAITPEGA
QILQIIGRCR ANVLISGGTG SGKTTLLNCL TQYIDDDERI ITCEDAAELQ LQQPHVVRLE
TRPPNIEGEG QVTMRELVRN CLRMRPERII VGEVRGPEAF DLLQAMNTGH DGSMGTLHAN
NPREALSRCE SMITMGGFSL PSRTIREMIC ASIDVVIQAA RLRDGSRRIT HITEVIGMEG
DTIITQDLFI YDMVGEDVNG NIIGRHRSTG IGRPKFWERA RYYGEEKRLA AALDAAEIEV
DV
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