| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3522 |
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| Symbol | |
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| ID | 4024036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3910043 |
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| End bp | 3911320 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963726 |
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| Product | putative pilus assembly protein cpaE |
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| Protein accession | YP_570646 |
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| Protein GI | 91977987 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.257718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCT ACGCACGCCA GAACCAGGAA GAGCCCGCGG CCGGCGCCTC GTCGTCCGCC
ACGACGCAGG ACGAGCACAT CGCGCCGGCG CCGCGTGTAT CAGTGCAGGC GTTCTGCGAA
TCGGTCGAGA CCGCGGCGGC CGTGCAGGCC GCCGGCGAAG ACCGCCGTCT CACCAAGGCG
CATCTGAAGA TCCAGATGGG CGGCATGATC GCGGCGATCG AAGCCTATCG CTCGGCGCCG
ACCCCGAACG TCATCATCCT CGAGACCGAT CCGCGCAACG ACGTGCTCGC CGGCCTCGAT
CAGCTCGCCA CGGTCTGCGA TCCGGGCACC CGCGTCATCG TGATCGGCAA GGTCAACGAC
GTCACGCTGT ATCGCGAGCT AGTTCGTCGC GGCGTCAGCG ACTACGCGAT CGCGCCGGTC
GATCCGATCG ACGTCGTGCG CTCGATCTGC AATCTGTTTT CGGCACCGGA AGCCAAGGCC
GTCGGCCGCA TCATCGCGAT CGTCGGCGCC AAGGGCGGTG TCGGCGCCTC CACCATCGCG
CACAACGTCG CCTGGGCGAT CGCCCGCGAT CTGGCGCTCG ACTCGGTCGT CGCCGACCTC
GACCTCGCTT TCGGCACCGC CGGCCTCGAC TACAACCAGG ACCCGCCGCA AGGCATCGCC
GAGGCGGTGT TCTCGCCGGA CCGCGTCGAC ACCGCCTTCG TCGATCGTCT GCTGTCGAAA
TGCACCGATC ATCTCAGCCT GCTGGCCGCG CCGGCGACGC TCGATCGGGT CTATGATTTC
GGCGCCGACG CGTTCGACTC GATCTTCGAC ACGCTTCGCG CGACGATGCC CTGCATCGTG
CTCGACGTGC CGCATCAATG GACCGGTTGG GCGAAACGCG CGCTGATCAA TGCCGACGAC
ATCCTGATCG TCGCCGCGCC TGACCTCGCC AATTTGCGCA ATGCCAAGAA TCTGTACGAT
CTGCTGAAGG CGTCGCGGCC GAACGATCGA CCGCCGTTAT ACTGCCTGAA CCAGGTCGGC
GTGCCGAAGC GGCCCGAGAT CAATGCGAGC GAGTTCGCCA AGGCGATCGA GAGCCAGCCG
ATCGTCAGCA TCCCGTTCGA TCCGCAGATG TTCGGTTCGG CCGCCAATAA CGGGCAGATG
ATCGCGGAGA TCGCGGCGTC TCACAAGACC ACCGAGATGT TCCTGCAGAT CGCCCAGCGA
CTGACGGGAC GCGGTGAAGC CAAGAAGCCG AAAGGCGGCT TCCTGTCGCC GATTCTGGAG
AAGCTGCGGG CCAGATAA
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| Protein sequence | MISYARQNQE EPAAGASSSA TTQDEHIAPA PRVSVQAFCE SVETAAAVQA AGEDRRLTKA
HLKIQMGGMI AAIEAYRSAP TPNVIILETD PRNDVLAGLD QLATVCDPGT RVIVIGKVND
VTLYRELVRR GVSDYAIAPV DPIDVVRSIC NLFSAPEAKA VGRIIAIVGA KGGVGASTIA
HNVAWAIARD LALDSVVADL DLAFGTAGLD YNQDPPQGIA EAVFSPDRVD TAFVDRLLSK
CTDHLSLLAA PATLDRVYDF GADAFDSIFD TLRATMPCIV LDVPHQWTGW AKRALINADD
ILIVAAPDLA NLRNAKNLYD LLKASRPNDR PPLYCLNQVG VPKRPEINAS EFAKAIESQP
IVSIPFDPQM FGSAANNGQM IAEIAASHKT TEMFLQIAQR LTGRGEAKKP KGGFLSPILE
KLRAR
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