Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3519 |
Symbol | |
ID | 4024033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3907039 |
End bp | 3907839 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637963723 |
Product | Flp pilus assembly CpaB |
Protein accession | YP_570643 |
Protein GI | 91977984 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCG CGCGCATCGT CGTCCTGACC ATTGCTATCG GCGCTGGCGC CGTTGCCGCC TATCTGGCGA GTGGCGGCGG CAACCAGGAG GCCGCCGGTC CGGCCGCGCC CGTCGCAGAA TTGCCGACCG TCGAAGTGCT GGTTGCGAAA TCCGATATTC CGCTCGGCCA GCCGGTCGGG CCCGGCGACA TGCAGTGGCA GACCTGGCCG GCAGCAACCG CGAGCGCCAA CTTCATTCGC CGCAACGAGC GCCCCGAAGC GACCACGCAG CTGGCAGGTT CGATCGCGCG GTCGCAATTC ATCGCCGGCG AGCCGATCCG CGAACAGAAG CTGGTCAAGG CGAACGGCTC CGGCTTCATG GCTGCGATCC TTCCGACCGG AATGCGCGCG GTCTCGACGG AGATCTCGCC GGAGACCGGC GCAGGCGGCT TCATCCTGCC GAACGACAGG GTCGACGTCA TTCTGTCGAA GCGCGACAAG AATCCCGACC GAGCCGGCAG CGGCGGCGAT GTGGTCAACT CTGAAACCAT CCTGAGCAAC GTGCGTGTTC TCGCGATCGA TCAGGCGATC GAGGAGAAGA ACGGGCAGAA GGTGGTGGTC GGCAAGACCG CCACGCTCGA ACTGAAGCCC GAACAGGCGG AATTCCTGGC GCGCGCGCGG CAGAGCGGCA CGCTGTCTTT GGCGCTTCGC AGCCTCGTCG ATGCCAACGC TCCGACAGCG ACCGAGGAGA TCGGCGGCAA ACGCGACAGC GTCAACGTCG TTCGCTACGG CGTTTCCACG CCAACGACGA TGCAGAAGTG A
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Protein sequence | MNTARIVVLT IAIGAGAVAA YLASGGGNQE AAGPAAPVAE LPTVEVLVAK SDIPLGQPVG PGDMQWQTWP AATASANFIR RNERPEATTQ LAGSIARSQF IAGEPIREQK LVKANGSGFM AAILPTGMRA VSTEISPETG AGGFILPNDR VDVILSKRDK NPDRAGSGGD VVNSETILSN VRVLAIDQAI EEKNGQKVVV GKTATLELKP EQAEFLARAR QSGTLSLALR SLVDANAPTA TEEIGGKRDS VNVVRYGVST PTTMQK
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