Gene RPD_3514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3514 
Symbol 
ID4024028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3903663 
End bp3904289 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content59% 
IMG OID637963718 
ProductTadE-like 
Protein accessionYP_570638 
Protein GI91977979 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCGC TGGTAAAGAT CTGGGTCGAT GCGCGCCGCT GCGGCGAGCG GCTGGCGAGA 
GACCGCAGCG GCCTTGCGGC GACGGAATTC GCCTTCATCG TCCCGCTGAT GTTGCTGATG
TTCTTCGCCA CGGTCGAAAT TTCCACGTGG GTCGCGGTCG ACCGCAAGGT GACGCTGGTG
TCCCGCACCC TGTCGGACCT TGTATCGCAG GCGACCTCGG TCACGGACAA AGATTTGCCG
AACGTGTTCC TGGCGAGCTA TGGCGTGCTG GCGCCCTATC CGACGGATAC CGCGGAGGCG
ACGATTTCCG AAATCTACGT GAACAACGCC GGGGTGGCCA AGGTGCAATG GAGCAAGTTG
GCAAAGGTTG CGAAAAGCGG CAACAACAAG CCTGTCGCGA CGATCGAAGT TTCGTCGCGC
AAGCCAGGAG ATACGGTGAC CACACTCCCG GACGGGCTCA AGGTCAAGGA CACCTATCTG
ATCCTGAGCG AAGTGAACTA TCAGTATACG CCTGCGGTCG GTTATTTTTT GGCGAAAACC
GGAGTCAAGC TGGCCGATGA ATCGTACACC CGGCCGCGCC AGTCGCTCTG CGTACTGTAC
GACACCCAAA TTTGTCCGAC GTTATGA
 
Protein sequence
MRALVKIWVD ARRCGERLAR DRSGLAATEF AFIVPLMLLM FFATVEISTW VAVDRKVTLV 
SRTLSDLVSQ ATSVTDKDLP NVFLASYGVL APYPTDTAEA TISEIYVNNA GVAKVQWSKL
AKVAKSGNNK PVATIEVSSR KPGDTVTTLP DGLKVKDTYL ILSEVNYQYT PAVGYFLAKT
GVKLADESYT RPRQSLCVLY DTQICPTL