Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3514 |
Symbol | |
ID | 4024028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3903663 |
End bp | 3904289 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637963718 |
Product | TadE-like |
Protein accession | YP_570638 |
Protein GI | 91977979 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCGC TGGTAAAGAT CTGGGTCGAT GCGCGCCGCT GCGGCGAGCG GCTGGCGAGA GACCGCAGCG GCCTTGCGGC GACGGAATTC GCCTTCATCG TCCCGCTGAT GTTGCTGATG TTCTTCGCCA CGGTCGAAAT TTCCACGTGG GTCGCGGTCG ACCGCAAGGT GACGCTGGTG TCCCGCACCC TGTCGGACCT TGTATCGCAG GCGACCTCGG TCACGGACAA AGATTTGCCG AACGTGTTCC TGGCGAGCTA TGGCGTGCTG GCGCCCTATC CGACGGATAC CGCGGAGGCG ACGATTTCCG AAATCTACGT GAACAACGCC GGGGTGGCCA AGGTGCAATG GAGCAAGTTG GCAAAGGTTG CGAAAAGCGG CAACAACAAG CCTGTCGCGA CGATCGAAGT TTCGTCGCGC AAGCCAGGAG ATACGGTGAC CACACTCCCG GACGGGCTCA AGGTCAAGGA CACCTATCTG ATCCTGAGCG AAGTGAACTA TCAGTATACG CCTGCGGTCG GTTATTTTTT GGCGAAAACC GGAGTCAAGC TGGCCGATGA ATCGTACACC CGGCCGCGCC AGTCGCTCTG CGTACTGTAC GACACCCAAA TTTGTCCGAC GTTATGA
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Protein sequence | MRALVKIWVD ARRCGERLAR DRSGLAATEF AFIVPLMLLM FFATVEISTW VAVDRKVTLV SRTLSDLVSQ ATSVTDKDLP NVFLASYGVL APYPTDTAEA TISEIYVNNA GVAKVQWSKL AKVAKSGNNK PVATIEVSSR KPGDTVTTLP DGLKVKDTYL ILSEVNYQYT PAVGYFLAKT GVKLADESYT RPRQSLCVLY DTQICPTL
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