| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3507 |
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| Symbol | |
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| ID | 4024021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3895360 |
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| End bp | 3896124 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637963711 |
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| Product | ABC transporter related |
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| Protein accession | YP_570631 |
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| Protein GI | 91977972 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0491012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCTAC TGGAGACCCG TACCACCTCG GCGATGCTGT ATCTCGACGG CGTCCACGTC
TCGTTCGACG GCTTCCGTGC GATCAACAAT CTGTCGTTGA CGCTCGAGCC CGGCGAGATG
CGCGCCATCA TCGGCCCGAA CGGCGCCGGC AAGACCACGA TGATGGACAT CATCACCGGC
AAGACCAAGC CCGACAAAGG CGAGGTGGTG TTCGATGGCA CCACCGATCT CACCAAGCTC
GACGAGACCG AGATAGCCAC GCTCGGCATC GGCCGCAAAT TCCAGAAGCC GACGGTGTTC
GAAAGCCAGA CCATCGAGGA CAATCTGCTG CTCGCGCTCA ACGTCGACCA TCGCGTTCGC
GGCACGCTGT TCTGGCGGCG GAGCGAACCG GAGAGCAAGC GGATCGACCG CGTGCTCGAC
ATCATCAGGC TCGGCGACGC GCGTGATCGG CTCGCAGGCT CGCTGTCGCA CGGCCAGAAG
CAATGGCTCG AAATCGGTAT GCTGCTGGCA CAGGACCCCA AGTTGTTGCT GGTCGACGAG
CCGGTCGCCG GCATGACCGA CGTCGAAACT CATCAGACCG CCGAGCTGTT GAAAGAGATC
AACAGCCACG ACAAGACCGT GGTCGTTGTC GAGCACGACA TGACCTTCGT GCGCGAACTC
GGTGTCAAGG TGACGTGCTT GCACGAGGGC ACGGTGCTGG CCGAAGGAAG TATCGACGAC
GTCTCGGCCA ACGAGCGCGT CGTCGAAGTG TATCTGGGGC GATGA
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| Protein sequence | MSLLETRTTS AMLYLDGVHV SFDGFRAINN LSLTLEPGEM RAIIGPNGAG KTTMMDIITG
KTKPDKGEVV FDGTTDLTKL DETEIATLGI GRKFQKPTVF ESQTIEDNLL LALNVDHRVR
GTLFWRRSEP ESKRIDRVLD IIRLGDARDR LAGSLSHGQK QWLEIGMLLA QDPKLLLVDE
PVAGMTDVET HQTAELLKEI NSHDKTVVVV EHDMTFVREL GVKVTCLHEG TVLAEGSIDD
VSANERVVEV YLGR
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