| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3496 |
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| Symbol | |
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| ID | 4024010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3886814 |
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| End bp | 3887779 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963700 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_570620 |
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| Protein GI | 91977961 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGTG CAGCCGATCG ACTCACCCGA TTCCGCGACA GGCTCGAGCT GCCGCTGATC
GCGGCGCCGA TGTTTCTCGT GTCCGGCGTC GATCTGGTCG CGACGGCCTG CGCGAACGGA
GTGATCGGGT CTTTTCCGAC GGTGAATTGC CGCACGACGG AACAGCTTGA AGCGTGGCTC
ACGTCGATCG CGCAACGATT GGCGACGCTC GAGCAGACCA GCGGCAAAGC GGCCGCGCCG
TGGTGCCCGA ATCTGATCGT GCATCGCTCC AATGCGCGGC TCGCCGACGA CCTCGCAGTG
CTGCTGATGC ACAGGCCGGA GATCGTGATC ACCAGCGTCG GCTCGCCGGA GCCGGTGATC
AAACAATTGC ATGATATCGG AACCATGGTG CTGGCCGACG TCGCCAGCAT CCGCCACGCC
GAGCGCGCCG TTGCGGCGGG AGCAGACGGG CTGGTGCTGT TGACCGCAGG CGCGGGCGGC
CAGACCGGCT GGCTCAATCC GTTCGCCTTC GTCCGCGCCG TGCGGCAGTT CTTCGACGGC
GTCGTCGTGC TGGCCGGCGG CATCAGCGAC GGCGTCGCGC TGCGCGCGGC GATGACGCTC
GGCTGCGACC TCGCTTACAT GGGCACCAAA TTCATCGCGA CGCAGGAGAG CGCCGCCGAT
CCGCGCTACA AGGCGATGCT GGTGGATAGT TCCGCCGACG ACATCCTGCT GACGAAAGCG
TTCACCGGAT TGCAGACCAG CATGTTGCGG CCGTCGATTG TCGCCGCCGG GCTCGATCCC
GATGATCTGC CGCAGCGCGG GGCGATCGAC ATCGGCAAGG ACATCGACAT CGGCGCACGC
GAAAGCCGGC CGCAACGCTG GCGCGATATC TGGAGCGCGG GGCATTCGAC CTCGGGCGTC
GGCGGCATCG TGCCGATCGC GGATCTGGTC AAGCAGACCG TATCCGAATT CCGCTCAGCA
GGATAA
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| Protein sequence | MSRAADRLTR FRDRLELPLI AAPMFLVSGV DLVATACANG VIGSFPTVNC RTTEQLEAWL
TSIAQRLATL EQTSGKAAAP WCPNLIVHRS NARLADDLAV LLMHRPEIVI TSVGSPEPVI
KQLHDIGTMV LADVASIRHA ERAVAAGADG LVLLTAGAGG QTGWLNPFAF VRAVRQFFDG
VVVLAGGISD GVALRAAMTL GCDLAYMGTK FIATQESAAD PRYKAMLVDS SADDILLTKA
FTGLQTSMLR PSIVAAGLDP DDLPQRGAID IGKDIDIGAR ESRPQRWRDI WSAGHSTSGV
GGIVPIADLV KQTVSEFRSA G
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