| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3478 |
|---|
| Symbol | |
|---|
| ID | 4023992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3859886 |
|---|
| End bp | 3860389 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637963682 |
|---|
| Product | carbohydrate kinase, thermoresistant glucokinase |
|---|
| Protein accession | YP_570602 |
|---|
| Protein GI | 91977943 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3265] Gluconate kinase |
|---|
| TIGRFAM ID | [TIGR01313] carbohydrate kinase, thermoresistant glucokinase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.636371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTGT CCGGCTCCGG CAAAAGCACG ATCGGCGAAC AGCTCGCCGA GCGGCTCGGC
TGGGCCTATC GGGACGCCGA CGATTTTCAT CCTCCCAGCA ATGTCGAGAA GATGAGCGCG
GGCCAGCCGC TCACCGACGA CGACCGCTGG CCCTGGCTGC GCGCCATCGC CGCCGAGATC
GATCGGATTG CCGACAGCGG GGACCATGCC GTGTTCGGAT GCTCGGCGCT GAAGCGGGCC
TATCGCGACA TTCTCGTGCA CGGCCGTGAC GACGTCCGGA TCGTGTATCT CGACGGCAGC
CGCGCGCTGA TCGCCGAGCG GATGGCGGCG CGCAAGAACC ATTTCATGCC GCCCGGGCTG
CTCGACAGCC AGTTCGCGAC GCTGGAAAAG CCCGGCCCGG ACGAGCGTCC GTTCGTCGTC
GGCATCGACG CCTCGGTCGG GCAGATCGTC GACGCCATCG TCGAACAGCT TCCCCGGCCT
TTTCCTCAGC AGAGTCTTAT CTAA
|
|---|
| Protein sequence | MGVSGSGKST IGEQLAERLG WAYRDADDFH PPSNVEKMSA GQPLTDDDRW PWLRAIAAEI
DRIADSGDHA VFGCSALKRA YRDILVHGRD DVRIVYLDGS RALIAERMAA RKNHFMPPGL
LDSQFATLEK PGPDERPFVV GIDASVGQIV DAIVEQLPRP FPQQSLI
|
|---|
| |