| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3475 |
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| Symbol | |
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| ID | 4023989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3856565 |
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| End bp | 3857605 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963679 |
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| Product | 6-phosphogluconate dehydrogenase-like protein |
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| Protein accession | YP_570599 |
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| Protein GI | 91977940 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.304254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCG GCATGGTCGG CCTCGGACGA ATGGGCGGCA ACATCGTTCG TCGGCTCATG
AACGATGGCC ACCATGCCGT GGTGTATGAT CGGGATCCCA ACGTCGTCGA AGCGCTGACG
CGCGAGGGCG CGGCGGGCGC AGCCAGCCTG GACGATCTGG TCGGCAAGCT CGACGCGCCG
CGCGCGGTGT GGGTGATGCT GCCTGCCGGT CAGATCACCG AGACAACGAT CGAAACACTC
GGCAAGCTGC TCTCGCCCGG CGACGTCATC ATCGACGGCG GCAACACCTT CTGGCAGGAC
GACATCCGCC GCGCCAGGAC CCTCAAAGAG AACAACCTGC ACTACGTCGA TGTCGGCACC
TCCGGCGGCA TCTGGGGCTA TGAGCGCGGC TACTGCATGA TGATCGGCGG CGACAAACAG
ATCGTCGACC GGCTCGATCC GATCTTCGCC ACGCTGGCGC CGGGCATCGG CGAGATACCT
CGCACGCCGG GCCGCGACGG CCGCGATCCG CGCGTCGAGC GGGGCTACCT CCATGCCGGG
CCTGTCGGCG CCGGACATTT CGTCAAGATG GTTCACAACG GCATCGAATA CGGCCTGATG
CAGGCCTATG CCGAAGGCTT CGACATTCTC AAGAACGCCA ATATCGACGT GCTGCCGAGC
GAGCATCGCT TCGATCTCGA CATCGCCGAC ATCGCCGAGG TGTGGCGGCG CGGCAGCGTG
ATCCCGTCCT GGCTGCTGGA TCTCACCGCA TCGGCGCTCG CCAGCAATGC GACGCTCGAC
AGTTACTCCG GCTTCGTCGA GGATTCCGGG GAAGGCCGCT GGACCATCAA CGCCGCGATC
GAAGAGGCCG TGCCCGCCGA GGTGCTGACA TCGGCGCTGT TCGCACGCTT CCGTTCGCGC
AAGGAACATA CCTTCGCTGA AAAAATTCTC TCGGCGATGC GGGCGGGCTT TGGCGGCCAC
AAGGAGCCGC AGCAGCACCC CGACCCGGCG CAGCAGGCGG CGCCGGATCA TCTCCTGAAA
CCGAAAGCGG AGCGCGCGTG A
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| Protein sequence | MQLGMVGLGR MGGNIVRRLM NDGHHAVVYD RDPNVVEALT REGAAGAASL DDLVGKLDAP
RAVWVMLPAG QITETTIETL GKLLSPGDVI IDGGNTFWQD DIRRARTLKE NNLHYVDVGT
SGGIWGYERG YCMMIGGDKQ IVDRLDPIFA TLAPGIGEIP RTPGRDGRDP RVERGYLHAG
PVGAGHFVKM VHNGIEYGLM QAYAEGFDIL KNANIDVLPS EHRFDLDIAD IAEVWRRGSV
IPSWLLDLTA SALASNATLD SYSGFVEDSG EGRWTINAAI EEAVPAEVLT SALFARFRSR
KEHTFAEKIL SAMRAGFGGH KEPQQHPDPA QQAAPDHLLK PKAERA
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