| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3474 |
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| Symbol | |
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| ID | 4023988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3853655 |
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| End bp | 3856507 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963678 |
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| Product | bifunctional transaldolase/phosoglucose isomerase |
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| Protein accession | YP_570598 |
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| Protein GI | 91977939 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0166] Glucose-6-phosphate isomerase
[COG0176] Transaldolase |
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| TIGRFAM ID | [TIGR00876] transaldolase, mycobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.438566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCG TCAAAGCGCT CGAACAACAC GGCCAGGCTG TCTGGCTGGA TTTCCTGGCC
CGCGGCTTTA TCGCCAAGGG TGACCTGAAG AAGCTGATCG ACGGCGACGG CGTGAAGGGT
GTCACCTCCA ATCCGTCGAT CTTCGAGAAG GCGATCGGCT CGTCGGACGA ATATGACGGT
GCGATCGGGG CCGCCCTGAA GCAGGGCGAC CGTTCGGTCG GCGAATTGTA CGAGGCGGTG
GCGGTCGAGG ACATTCAGCA CGCGGCCGAC GTGCTGCGCC CGACCTACGA CAAGCTCGAA
GGCCGCGACG GCTTCGTCAG CCTCGAAGTT TCACCCTATC TGGCGCTCGA CACCAAGGCG
ACCATCGTCG AGGCCGAGCG GCTGTGGGGC GCGGTCAAGC GCGAGAACCT GATGGTCAAG
GTGCCGGCGA CCCGGCAGGG CCTGCCCGCG ATCAAGCACC TGATCTCGAA GGGCATCAGC
GTCAACATCA CGCTGCTGTT TTCGCAGAAA GTCTATGTCG AGGTCGCGGA AGCCTATCTC
TCGGGGCTCG AAGCCCTGAT CGCGAGCGGG GGCGACCCGT CGCATGTCGC CAGCGTCGCC
AGCTTCTTCG TCAGCCGGAT CGACAGTGCG GTCGACAAAG AACTCGACGA CAAGATTGCC
AAGGCCAACG ACCCCGCCGA GAAGGCGCGA TTGGAAAAGC TGAAGGGCAA GATCGCGATC
GCCAACGCCA AGCTCGCTTA TCAGGACTAC AAGCGGCTGT TCTCCGGCGA CCGCTGGAAG
AAGCTCGAGA TTTGCGGCGC CAAGCCGCAG CGGCTGCTGT GGGCCTCGAC CGGCACCAAG
AACAAGGCCT ACAGCGACGT GCTGTATATC GAGGAGCTGA TCGGACCCGA CACGGTCAAC
ACCGTGCCGC CGTCGACGCT CGATGCGTTC CGCGATCACG GCAAGGCCCG CGCCAGCCTC
GAAGAAAACG TCGACGACGC CCGCGCGGCG TTGAAGGACC TCGACGGCGT CGGCATCTCG
CTCGACAAGA TCACCGACAG GCTGGTGACC GAGGGCGTGC AGCTCTTCGC CGACGCATTC
GACAAGCTGC TCGGCGCGGT CGCATCCAAG CGCGAGACCG TGCTCGCCGG CGGCGTCAAT
ACGCAGAAGC TCGCGCTCGC GGCCGACCTC GCCAACTCCG TCAAGGAGCA CGGCGAGGAG
TGGCGCAACA CCGGCAAGAT TCGCAAGCTG TGGGACCAGG ACAAATCGGT GTGGACCGGC
GCCGACGAGG ACAAATGGCT CGGCTGGCTG AATTCCGCCG CAGCGGAAAA GGCGAAGCTC
GCCGACTACG CGGAGTTCGC GAAATGGGTG AAGGCGCGCG GCTTCACCGA TGCCGTCGTG
CTCGGCATGG GCGGGTCGAG CCTCGGCCCG GAAGTGCTGG CCAAGACCTT CGCACAGCAG
CCGGGCTTCC CGAAGCTGCA CGTTCTGGAC TCCACCGATC CGGCGCAGGT GCGCTCGCTG
GAGAGCAGCG TCACATTGGC GACCACGCTG TTCATCGTGT CGTCCAAATC CGGCGGCACC
ACCGAGCCGA ACGCGATGAA GGACTACTTC GTCGCGCGCG TCGGCGAGAA CGTCGGCGTC
GACAAGGCCG GCCAACATTT CGTCGCGGTG ACCGATCCCG GCTCGTCGAT GGAGAAGGTC
GCGACCGCAG CGAAATTCGC CCGGATCTTC CACGGCAATC CGACGATCGG CGGTCGCTAT
TCGGTGCTGT CGCCGTTCGG CATGGCGCCG GCCGCCGCCG CCGGCCTCGA TCTCGGAAAG
TTCCTCGATC TGACACTCGC AATGGTGCGC TCCTGCGGGC CGGACGTGCC GCCGCAGGAA
AATCCCGGCG TGCAGCTCGG ACTTGCGATG GGCTGCGCTG GCCTGCAAGG CCGCGACAAG
GTGACGATCA CCTCCTCCAG GGCGATCGCC GATTTCGGCG CCTGGGCCGA GCAACTGATC
GCCGAGTCGA CCGGCAAGGA CGGCAAGGGA CTGATCCCGA TCGACGGCGA GCCGCTGGCC
GAGCCCTCGA CCTACGGCAA CGACCGGCTG TTCATCGATC TGCGTATCGA GAGCGAAAGC
GACGCCGCGC ATGACGGCAA GCTCGCGGCG CTGGAGCAAG CAGGACATCC GGTGGTGCGG
ATCGTGCTGA AATCGCCCGA CGCCATCGGC CAGGAGTTCT TCCGCTTCGA ATTCGCCACC
GCGGTCGCGG GCGCAATCCT CGGCATCAAT CCGTTCAATC AGCCGGATGT GGAATCCGCC
AAGATCAAGA CCCGCGAACT GACCGCGGCG TTCGAGACAT CCGGCGCACT GCCCGCGGAG
AAGCCGGCGC TGGCCACCGC GCAAGCCGAT CTCTACACCG ACGAGTCCAA CGCCGCCGCG
CTACGCAAGG CCGGCGCCGA CGGCACGCTC GGCTCGTGGA TCAAGGCGCA TCTGTCGCGC
TCGCAGGCCG GCGACTACGT CGCGCTGCTC GCCTATATCG AGCGGAATGC CGCGCATATC
GACGCGCTGC AGACGATGCG GCTCGCGGTG CGCGACGCCA GGCATCTGGC GACCTGCGCC
GAGTTCGGTC CGCGCTTCCT GCACTCGACC GGCCAGGCCT ACAAAGGCGG ACCGGACAGC
GGCGTGTTTC TGCAGATCAC CGCCGACGAC GCCGAGGATC TTCCCGTCCC CGGCCAGACC
GCCAGCTTCG GCGTGATCAA GGCGGCGCAG GCCCGCGGCG ATTTCGACGT GCTGACCGAA
CGCGGCCGCC GCGCGCTGCG GGTCCACATC AAAGGCGATC TCGGCGCCGG ACTGAAAGCG
CTCGACGCCG CGATCCGCGA CGCCTTGAAC TGA
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| Protein sequence | MNPVKALEQH GQAVWLDFLA RGFIAKGDLK KLIDGDGVKG VTSNPSIFEK AIGSSDEYDG
AIGAALKQGD RSVGELYEAV AVEDIQHAAD VLRPTYDKLE GRDGFVSLEV SPYLALDTKA
TIVEAERLWG AVKRENLMVK VPATRQGLPA IKHLISKGIS VNITLLFSQK VYVEVAEAYL
SGLEALIASG GDPSHVASVA SFFVSRIDSA VDKELDDKIA KANDPAEKAR LEKLKGKIAI
ANAKLAYQDY KRLFSGDRWK KLEICGAKPQ RLLWASTGTK NKAYSDVLYI EELIGPDTVN
TVPPSTLDAF RDHGKARASL EENVDDARAA LKDLDGVGIS LDKITDRLVT EGVQLFADAF
DKLLGAVASK RETVLAGGVN TQKLALAADL ANSVKEHGEE WRNTGKIRKL WDQDKSVWTG
ADEDKWLGWL NSAAAEKAKL ADYAEFAKWV KARGFTDAVV LGMGGSSLGP EVLAKTFAQQ
PGFPKLHVLD STDPAQVRSL ESSVTLATTL FIVSSKSGGT TEPNAMKDYF VARVGENVGV
DKAGQHFVAV TDPGSSMEKV ATAAKFARIF HGNPTIGGRY SVLSPFGMAP AAAAGLDLGK
FLDLTLAMVR SCGPDVPPQE NPGVQLGLAM GCAGLQGRDK VTITSSRAIA DFGAWAEQLI
AESTGKDGKG LIPIDGEPLA EPSTYGNDRL FIDLRIESES DAAHDGKLAA LEQAGHPVVR
IVLKSPDAIG QEFFRFEFAT AVAGAILGIN PFNQPDVESA KIKTRELTAA FETSGALPAE
KPALATAQAD LYTDESNAAA LRKAGADGTL GSWIKAHLSR SQAGDYVALL AYIERNAAHI
DALQTMRLAV RDARHLATCA EFGPRFLHST GQAYKGGPDS GVFLQITADD AEDLPVPGQT
ASFGVIKAAQ ARGDFDVLTE RGRRALRVHI KGDLGAGLKA LDAAIRDALN
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