| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3468 |
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| Symbol | |
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| ID | 4023982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3847622 |
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| End bp | 3849400 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637963672 |
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| Product | radical SAM family protein |
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| Protein accession | YP_570592 |
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| Protein GI | 91977933 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.453671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGATTG CCGAGGACCG GCCGAAGCGC CGCCGCTTTC AGCTGCTGCT GATCAAGCCG
TCGCATTACG GCGACGATGG CTACGTGATC CGGTGGTGGC GGGCGATGAT CCCGTCCAAC
TCGCTGGCGA GCCTTTACGG GATTGCGCAG GAAAGCGCCG CGCGGCAAGT GCTCGGTCCG
GATGTCGAGA TCGACATCGA AGCGATCGAC GAGTTCAACA CCAGGATCGA CATTCCCAAG
CTGTTGAAGC GGCTCGCCGC GCATGGCAAT TTCGGCATGG TCGGGCTGAT CGGCGTACAG
TCGAATCAGT ATCCGCGCGC GCTCGACATT GCCCGGCCGT TTCGCGCCGC CGGTGTGCAG
GTCGTCATCG GCGGCTTTCA CGTCTCGGGC TGTCTGTCGA TGCTCGACGG CCAAGCGGTC
GATCTCGACG CCTGCCGCGA CCTCGGCGTC TCGATTTTCG CCGGCGAGGC TGAGGGGCGG
ATCGATCGGC TGCTGCAGGA TGCGGCGAAT GGGAGTCTGC AGCCGCTGTA CAACTATCTC
GACGATCTGC CCGGCATCGA AGGCACGCCG GTGCCGTTTC TGCCGCTCGC CAACGTCAAG
CGCACGCTGG GTCTCTCGAC TTCGTTCGAT GCCGGTCGCG GCTGTCCGTA TCAGTGCTCG
TTCTGCACCA TCATCAACGT TCAGGGTCGC AAGTCGCGCT ATCGCACGCC GGACGATGTC
GAGGCGCTGG TGCGCGCCAA CTGGAAGCAG GGCGTCTCGA AGTTCTTCAT CACTGACGAC
AATTTCGCGC GCAATAAGGA TTGGGAAGCG ATCCTCGACC GCTTGATCTG GCTGAAGGAA
GAGCAGGGCA TCCCGCTCGG CTTGCTGATC CAGGTTGACA CGCTGTGTCA CAAGATCCCG
AACTTCATCG AGAAAGCCAA ACGTGCGGGC GTCACCCGGG TGTTCCTCGG GCTCGAGAGC
ATCAATCCGG AGACCTTGCT GCTGGCGAAT AAGCGGCAGA ACAAGATCAC CGAGTATCGC
GCGATGCTGC TGGCGTGGAA GGCGCAGGGC ATCATCACCT TGGCCGGCTA CATCCTCGGC
TTTCCCGCCG ACACGCCGGA GAGCATTCTT GCCGACATCG ACATCATCAA GCGCGAACTG
CCGATCGACA TTCTGGAGTT CTTCTGCCTG ACGCCGCTGC CAGGCTCGGA AGATCACCAG
AAGCTGTGGA AGGCCGGGAT CGCGATGGAC GCCGACCTCA ACCGATACGA CATCGAGCAC
GTCTGCACCG CGCATCAGAA GATGTCGCAG CAGGCGTGGG AGGACGTCTA TCAGCAGGTC
TGGCGGCACT ACTATTCGCC GGCGCACATT GAGACATTGT TGCGCCGCGC CGCGAAGACC
GGCATCAAGC TGGACAGCAT GGTGAAGCTC TTGCTGACCT TCTCGCTGGC GGTGTCGCTG
GAGAACGTCC ACCCGCTGCA GAGCGGCGTG TTCCGGCTCC GGCATCCGTC GGAGCGGCGG
CCCGGCCTGC CGCGTGAGAA TGCCATCGCA TTCTGGCCGC GACTGGCCTT CGAACTCGCT
CACAAGACCA CCGTGATCCT GTCGACGGCA TGGGGACTGA GCAAGGTTGC ATTCCGGGTG
GCGCGCGATC CGAAGCGCTA CGACTACACC GACGCGGCGC TGACGCCGGT TTCGGATGAG
GACGAGTCCG AGCTCGAGAT GTTCACCCAT ACAGCCGCGG CGAAGCAGGC GGTGGCGCAT
CGTAACAAAG TGCTGAATCT GACCCGCGGC GCGGCCTAG
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| Protein sequence | MSIAEDRPKR RRFQLLLIKP SHYGDDGYVI RWWRAMIPSN SLASLYGIAQ ESAARQVLGP
DVEIDIEAID EFNTRIDIPK LLKRLAAHGN FGMVGLIGVQ SNQYPRALDI ARPFRAAGVQ
VVIGGFHVSG CLSMLDGQAV DLDACRDLGV SIFAGEAEGR IDRLLQDAAN GSLQPLYNYL
DDLPGIEGTP VPFLPLANVK RTLGLSTSFD AGRGCPYQCS FCTIINVQGR KSRYRTPDDV
EALVRANWKQ GVSKFFITDD NFARNKDWEA ILDRLIWLKE EQGIPLGLLI QVDTLCHKIP
NFIEKAKRAG VTRVFLGLES INPETLLLAN KRQNKITEYR AMLLAWKAQG IITLAGYILG
FPADTPESIL ADIDIIKREL PIDILEFFCL TPLPGSEDHQ KLWKAGIAMD ADLNRYDIEH
VCTAHQKMSQ QAWEDVYQQV WRHYYSPAHI ETLLRRAAKT GIKLDSMVKL LLTFSLAVSL
ENVHPLQSGV FRLRHPSERR PGLPRENAIA FWPRLAFELA HKTTVILSTA WGLSKVAFRV
ARDPKRYDYT DAALTPVSDE DESELEMFTH TAAAKQAVAH RNKVLNLTRG AA
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