Gene RPD_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3467 
Symbol 
ID4023981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3846766 
End bp3847050 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content65% 
IMG OID637963671 
Productexcinuclease ABC subunit C 
Protein accessionYP_570591 
Protein GI91977932 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.506637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAG ATCATCCCAT CGAAGAATGC TTCGTCTATG TGCTGGGCTG CGCCGGTCCG 
GGCCGTTATC TAACCTATGT CGGCTGGACG CTCGACCTCG ACCGCCGCCT GACGCAGCAC
AATGCCGGCG CCGGCGCACG CTCGACCCGC GGACGGACCT GGGTGCTGAT CCACAGCGAG
CGCTTTACCC GAAGGCAGGA CGCAATGAGC CGCGAATGGC ACTTGAAGCG CGACCGCGCC
TTCCGTCGTC GCCTCGCCGC CAAAGCTCAG GGCCTCGGGG TCTGA
 
Protein sequence
MMQDHPIEEC FVYVLGCAGP GRYLTYVGWT LDLDRRLTQH NAGAGARSTR GRTWVLIHSE 
RFTRRQDAMS REWHLKRDRA FRRRLAAKAQ GLGV