Gene RPD_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3464 
Symbol 
ID4023978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3844438 
End bp3845052 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content64% 
IMG OID637963668 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_570588 
Protein GI91977929 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.112856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGC TCGAACCCAT CACCCTCAGC GGTCCCCATG CGACGTTGGA GCCGTTGGCG 
CCGGCGCATC GCGATGGACT GATCGAGGCG GTGCAGGACG GCGAGTTGTG GAAGCTGTGG
TACACGGCCG TGCCGGCGCC GGACCGGGTC GAGGCCGAGA TCGCTCGGCG GCTCGCGCTG
CAGGCGCAGG GTGCGATGCT GCCATGGACG GTGAAGGATG CGGCGGGCCG GATCGCCGGC
ATGACCACCT ACATGAATGT CGATGCCGCC AGCCGCCGGG TGGAGATCGG CTCGACCTGG
TACGCGCAAC GCGTGCAGCG CACCGGGCTC AACACGCAAT GCAAGCAGTT GCTGCTTCAG
CACGCGTTCG AGGCGCTCGA CTGCATCGCC GTCGAATTCC GCACGCATTT CTTCAATCAT
CAGTCGCGGC GCGGGATCGA ACGGCTCGGC GCCAAGCAGG ATGGTATCCT GCGCAATCAT
CAGATTGCGC CGAACGGCAC GCTGCGCGAT ACCGTGGTGT ATTCGATCAT CGCCGCTGAA
TGGCCGACGG TGAAAGCGCA CCTTAACTAT CAGCTCTCCG GAAAACTACG GGCGGAAACA
CCTGGTTCCA TTTGA
 
Protein sequence
MPWLEPITLS GPHATLEPLA PAHRDGLIEA VQDGELWKLW YTAVPAPDRV EAEIARRLAL 
QAQGAMLPWT VKDAAGRIAG MTTYMNVDAA SRRVEIGSTW YAQRVQRTGL NTQCKQLLLQ
HAFEALDCIA VEFRTHFFNH QSRRGIERLG AKQDGILRNH QIAPNGTLRD TVVYSIIAAE
WPTVKAHLNY QLSGKLRAET PGSI