Gene RPD_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3462 
Symbol 
ID4023976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3843096 
End bp3843938 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content62% 
IMG OID637963666 
ProductATPase 
Protein accessionYP_570586 
Protein GI91977927 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0889695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTA CCGGCACCAA GGACTACGTG GCGACCGACG ATCTCAAGGT CGCCGTCAAT 
GCGGCGATCG TACTCGAGCG GCCGCTCTTG GTGAAAGGCG AACCCGGCAC CGGCAAGACC
GTGCTGGCCG AGGAAGTCGC CAAGGCGCTC GATGCCCCGC TGCTGACCTG GCACATCAAG
TCGACCACCA AGGCGCAGCA GGGGCTGTAC GAATACGACG CCGTGTCACG GCTGCGCGAC
AGCCAGCTCG GTGATCCGCG CGTCTCCGAC ATTTCCAACT ACATCAGGCG CGGCAAGCTC
TGGGAAGCGT TCACCCACGG CCAGCGCCCG GTGCTTTTGA TCGACGAGAT CGACAAGGCC
GACATCGAAT TCCCGAACGA CCTTTTGCTC GAACTCGACC GCATGGAATT TCACGTCTAC
GAGACCGGCG AGACCATCAA GGCCGAGAAG CGCCCGATCG TGATGATCAC CTCGAACAAC
GAGAAGGAGC TACCCGACGC GTTCCTGCGC CGTTGCTTCT TCCACTATAT CAAGTTTCCC
GACGCCGACA CCATGCAGCA GATCGTCGAC GTCCACTTCC CCGGCATCAA GCAGCGGCTG
GTGCAGGAGG CGCTCAAGAT CTTCTTCGAA GTGCGCGACG TTCCGGGCTT GAAGAAAAAA
CCTTCGACCT CGGAGCTGCT CGATTGGCTC AAGCTCCTGC TCAACGAGGA CATGAGTCCG
GAGACGCTGC GCGAACGCGA CCCGCGCAAG CTGATCCCGC CGCTGCACGG CGCGCTGCTC
AAGAACGAAC AGGATGTCCA CCTGTTCGAG CGGCTGGCGT TCCTCAGCCG CCGCGAGGTG
TGA
 
Protein sequence
MKFTGTKDYV ATDDLKVAVN AAIVLERPLL VKGEPGTGKT VLAEEVAKAL DAPLLTWHIK 
STTKAQQGLY EYDAVSRLRD SQLGDPRVSD ISNYIRRGKL WEAFTHGQRP VLLIDEIDKA
DIEFPNDLLL ELDRMEFHVY ETGETIKAEK RPIVMITSNN EKELPDAFLR RCFFHYIKFP
DADTMQQIVD VHFPGIKQRL VQEALKIFFE VRDVPGLKKK PSTSELLDWL KLLLNEDMSP
ETLRERDPRK LIPPLHGALL KNEQDVHLFE RLAFLSRREV