Gene RPD_3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3457 
Symbol 
ID4023971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3837917 
End bp3838774 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content67% 
IMG OID637963661 
Product3-mercaptopyruvate sulfurtransferase 
Protein accessionYP_570581 
Protein GI91977922 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.167949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCGACGACCC GCTGGTTTCC ACGGAATGGC TCGCTGCCCA TCTGGGCGAT 
CCGCAGGTCA AGCTCCTCGA CGCATCGTTC AAGATGCCGG GCGTCATGCC GCGGCCTAGC
GAAGACTATC TCGCGGCGCA TATTCCCGGC GCGGTGTATT TCGACGTCGA GGAGGTCTGC
GATCGAACCG ATACGCGGCC GCATATGTAT CCGGACGCCG CGCAGTTCGC GGGCGACGTC
GCGGCGATGG GTGTTTCCTC CGGCGACACC GTGGTCGTCT ACGATGCCGG CGGCTGGGTC
GCGGCGCCCC GGGCGTGGTG GATGTTCTTG TCGTTTGGCC ACCACAATGT CCGTATCCTC
GAAGGCGGCT TGAAGAAGTG GCAGGCGGAA GGCCGGCCGA TCGAGTCCGG CAAGCCGTCG
CCGAAGCCCG GTGCTTTCTC CGCGAAGCTC GATCCGAACT ATCTGCGCAG CAAGCAGCAG
CTGGTCGCCA ATCTGGATAA CGGCGCCGAG CAGGTGATCG ACGCCCGCGC CGCCGACCGC
TTCGAGGGGC GTGTCCCGGA GCCGCGCCCC GGCTTGCGTG CGGGGCACAT CCCCGGCAGC
CGCAACCTGC CGTACAACGA GCTGTTCGAC GCCGCGACCG GCTTGATGAA ATCGCGCGAC
GCGTTGCGTG AAGCCTTCAC CCGAGCCGGC GTCGATCTCG ATCGTCCGAT CGTCACGAGC
TGCGGCTCCG GCGTGTCTGC GCTGGTGCTG ACCCTGGCGC TGTATCGCCT CGGCGTTCGT
GGCACCGCGC TTTATGACGG GTCATGGTCG GAATGGGGGA TGCAGGACGG CCCGCCGGTC
GCGACCGGAC CGGCGTAA
 
Protein sequence
MTATDDPLVS TEWLAAHLGD PQVKLLDASF KMPGVMPRPS EDYLAAHIPG AVYFDVEEVC 
DRTDTRPHMY PDAAQFAGDV AAMGVSSGDT VVVYDAGGWV AAPRAWWMFL SFGHHNVRIL
EGGLKKWQAE GRPIESGKPS PKPGAFSAKL DPNYLRSKQQ LVANLDNGAE QVIDARAADR
FEGRVPEPRP GLRAGHIPGS RNLPYNELFD AATGLMKSRD ALREAFTRAG VDLDRPIVTS
CGSGVSALVL TLALYRLGVR GTALYDGSWS EWGMQDGPPV ATGPA