Gene RPD_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3454 
Symbol 
ID4023968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3835200 
End bp3836432 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content69% 
IMG OID637963658 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_570578 
Protein GI91977919 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA ATCGAATCTT GACGTTGTTG GCGACAGTTG CGGCGATCTC GGCTGGAACC 
TCCCTGGCGC ACGCGCAGAG CTATCCTTCC GCTCCGGGCT CCTATGCGAC GGCGACGCCG
GGCGACTATC GCCGCGGCTC GGAAATGCCG GATTTCGATA ATCTCGACGA CGAAGATGGT
CCTTCGGCCG GGCCGTCTGC GGCGCTGCCG CCGCCCGGCC CGGTGATGAC GCCGGACGAT
CCGCGCTATG GCCGCACGAT CGGCGCGCCA CCAGTCTATT CGGACCGCGC TCCGGCCCCG
CAGGGCCCCG TGATGTCGCC CGATGATCCG CGCTATGGCC GTCCGATGGG TGCTCCGCCG
GTCTATTCCG ATCGCGCTCC CGTGCCGCAG GGACCGGTGC TGTCGCCCGA CGACCCGCGC
TACGGCCGCC CGGCAGGTCC GCCCTCGGTG ATCTATTCCA ACCGCGGCGA TGGTTCGCCG
CGTCCGCCCG AAGTTGTCGG CACCGGACAG CCCGGTGTTC CGCAGCAGGC CACCGGCTCG
GTGCCGTTGG CGCCCCAGCT CGGCGCGGAT GGCCGGCCGC TGCAGGTGGC CGCCTTGCCG
CCGGAAGAGC AGCCGGAGGC CGATCAGAGC TTCCAACTGC CACCGAACCT GCGCCGTCAG
GAGGTTGCGT TCCAGACCAA GGAGCCAGCC GGCACCATCG TTGTCGATAC CAGCCACACG
TATCTTTATT ACGTTCTCGG CAATGGCCGA GCGATGCGTT ACGGCGTCCG TGTCGGGCGC
GACGGATTCA CCTGGAACGG CGTGCAGAAG GTCAGCCGCA AGGCGGAATG GCCGGATTGG
CATCCGCCGG CGGAAATGAT CGAACGCCAG CCTTATCTGC CGCGCTTCAT GGCGGGCGGC
CCCGGCAACC CGATGGGCGC GCGGGCGATG TATCTCGGCT CCACGGTGTA TCGCATCCAT
GGCACCAATC AGCCTTCGAC GATCGGCAAG TTCGTGTCGT CGGGTTGCAT CGGCATGCTG
AACGACGACG TCAGCGACCT GTTTGAACGG GTCAAGGTCG GCACACGCGT TGTGGTGCTG
CCGGGCGGCG CGCCGCCCAC GCCGACCGCG AGTGCGCAGC CGCAGCCGGT GGCGTCCGCC
GCGCCGGTGT CGCAGCCGCC GCAGATGTCC GCGGTGCCTG GAAGCCAGCC AACCATGGTC
GCGCCGCTGC CGGCGCCCGT CACGATCCGC TGA
 
Protein sequence
MMNNRILTLL ATVAAISAGT SLAHAQSYPS APGSYATATP GDYRRGSEMP DFDNLDDEDG 
PSAGPSAALP PPGPVMTPDD PRYGRTIGAP PVYSDRAPAP QGPVMSPDDP RYGRPMGAPP
VYSDRAPVPQ GPVLSPDDPR YGRPAGPPSV IYSNRGDGSP RPPEVVGTGQ PGVPQQATGS
VPLAPQLGAD GRPLQVAALP PEEQPEADQS FQLPPNLRRQ EVAFQTKEPA GTIVVDTSHT
YLYYVLGNGR AMRYGVRVGR DGFTWNGVQK VSRKAEWPDW HPPAEMIERQ PYLPRFMAGG
PGNPMGARAM YLGSTVYRIH GTNQPSTIGK FVSSGCIGML NDDVSDLFER VKVGTRVVVL
PGGAPPTPTA SAQPQPVASA APVSQPPQMS AVPGSQPTMV APLPAPVTIR