Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3452 |
Symbol | |
ID | 4023966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3833015 |
End bp | 3834664 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637963656 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_570576 |
Protein GI | 91977917 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.747993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCC AGTTCGTCTA TTTCATGCAG GGCCTGACCA AGGCCTATCC GACCCGCAAG GTGCTGGATA ACGTCCATCT GTCGTTCTAC CCCGACGCCA AGATCGGCGT GCTCGGCGTC AACGGCGCCG GCAAGTCGAC GCTGCTCAAG ATCATGGCCG GGATCGACAA GGAATACACC GGCGAGGCCT GGGTCGCCGA AGGCGCCCGC GTCGGCTATC TCGAACAGGA ACCGCAGCTC GATGCCGCGC TGAACGTGCG CGAGAACGTC ATGCTCGGCG TTGCCAAGCA GAAGGCGATC CTCGATCGCT ACAACGAGCT GGCGATGAAC TATTCCGAGG AAACCGCCGA CGAGATGACC GCGCTCCAGG ACCAGATCGA GTCCGCGGGG CTGTGGGATC TCGACAGCAA GGTCGACCAG GCGATGGACG CGCTGCGCTG CCCGCCCGAT GACGCAGACG TCACCAAGCT GTCCGGCGGC GAGCGCCGTC GCGTCGCGCT GTGCAAGCTG CTGCTCGACC AGCCCGAACT GTTGCTGCTC GACGAACCGA CCAACCATCT CGACGCCGAG TCGGTGTCTT GGCTCGAAAA TCATCTGCGC AACTATCCGG GCGCGATCCT GATCGTCACC CACGATCGTT ACTTCCTCGA CAACGTCACC TCCTGGATTC TCGAGCTCGA CCGCGGCAAG GGAATTCCCT ACGAGGGCAA CTACTCGTCC TGGCTGGTGC AGAAGCAGAA GCGGCTGCTG CAGGAGGGGC GCGAGGATGC GGCCCACCAG AAGACGCTCG AGCGTGAGCA GGAGTGGATC GCGTCGTCGC CGAAGGCACG CCAGGCCAAG TCCAAGGCGC GCTACCAGCG CTACGATGAA CTGCTTGCCA AGGCCAGCGA GAAGCAGACC CAGGCCGCGC AGATCATCAT TCCGGTGGCC GAGCGTCTCG GTAACAATGT GGTCGAATTT GATCACCTGA CCAAGGGCTT CGGCGACAAG CTGCTGATCG ACGACCTGAC CTTCAAGCTG CCGCCCGGCG GCATCGTCGG CGTGATCGGC CCGAACGGCG CCGGCAAGAC CACGCTGTTC CGGATGATCA CCGGGCAGGA AAAGCCCGAC CAAGGTACCA TCACGGTCGG CGAGACCGTG CATCTTGGCT ATGTCGATCA GTCGCGCGAC AGCCTCGACG CCAAGAAGAC CGTTTGGGAA GAGATTTCCG GCGGCAATGA GCAGATCCTG CTCGGCAAGA AGGAAGTTAA TTCGCGCGGC TATTGCTCGT CCTTCAACTT CAAGGGCGGT GACCAGCAGA AGAAGGTTGG TTCGCTGTCA GGCGGCGAGC GTAACCGCGT CCACCTCGCC AAGATGCTGA AGTCCGGCTC CAACGTGCTG CTGCTCGACG AACCGACCAA CGACCTCGAC GTCGATACGC TGCGGGCGCT GGAAGAGGCG CTCGAGGATT TCGCCGGCTG CGCCGTGATC ATCAGCCATG ACCGCTGGTT CCTCGACCGT ATCGCCACGC ATATCCTCGC CTTCGAGGAC GACAGCCACG TCGAATGGTT CGAAGGCAAC TTCCAGGACT ACGAGAAGGA CAAGATGCGC CGGCTCGGTC AGGACTCGGT GATCCCGCAC CGGGCGAAGT ATAAGAAGCT GACGCGGTGA
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Protein sequence | MARQFVYFMQ GLTKAYPTRK VLDNVHLSFY PDAKIGVLGV NGAGKSTLLK IMAGIDKEYT GEAWVAEGAR VGYLEQEPQL DAALNVRENV MLGVAKQKAI LDRYNELAMN YSEETADEMT ALQDQIESAG LWDLDSKVDQ AMDALRCPPD DADVTKLSGG ERRRVALCKL LLDQPELLLL DEPTNHLDAE SVSWLENHLR NYPGAILIVT HDRYFLDNVT SWILELDRGK GIPYEGNYSS WLVQKQKRLL QEGREDAAHQ KTLEREQEWI ASSPKARQAK SKARYQRYDE LLAKASEKQT QAAQIIIPVA ERLGNNVVEF DHLTKGFGDK LLIDDLTFKL PPGGIVGVIG PNGAGKTTLF RMITGQEKPD QGTITVGETV HLGYVDQSRD SLDAKKTVWE EISGGNEQIL LGKKEVNSRG YCSSFNFKGG DQQKKVGSLS GGERNRVHLA KMLKSGSNVL LLDEPTNDLD VDTLRALEEA LEDFAGCAVI ISHDRWFLDR IATHILAFED DSHVEWFEGN FQDYEKDKMR RLGQDSVIPH RAKYKKLTR
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