Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3450 |
Symbol | |
ID | 4023964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3831236 |
End bp | 3831829 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637963654 |
Product | hypothetical protein |
Protein accession | YP_570574 |
Protein GI | 91977915 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.603459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCA CGCCCGAGAC GCCCCAGCCG CCGAAGCGGC TGGGGCTACG CCCGATCCCG ATGCTGATCT TCGGCTCGCG CTGGCTGCAA CTGCCGCTCT ATGTCGGGCT CATCGTGGCC CAGGCGGTCT ATGTGGTGCT GTTCCTGAAG GAGCTGTGGC ATCTGATCTC GCATTCGTTC GATTTCAGCG AGCAGCAGAT CATGCTGGTG GTGCTCGGCC TGATCGACGT GGTGATGATC TCCAACCTTC TGGTGATGGT GATCGTCGGC GGCTACGAGA CCTTCGTGTC GCGGCTCAAT CTCAAGGGAC ATCCCGACGA GCCGGAGTGG CTCGGCCACG TCAACGCCAG CGTGCTGAAG ATCAAGCTGG CGATGGCGAT CATCGGCATC TCCTCGATCC ATCTACTGCG CACCTTCATC GAGGCCGGCA GCATCGGCTC GGCCACGCGC ACCACCAACT ACACCGCGGA GGGCGTGATG TGGCAGACCA TCATCCACAC CGTGTTCATC CTGTCGGCGA TCGGCATCGC TTATGTGGAC AAGCTTTCCA ACGACGCCGT GGCGCGGGAA GCACATGGCG GGTCTCATCA TTGA
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Protein sequence | MSITPETPQP PKRLGLRPIP MLIFGSRWLQ LPLYVGLIVA QAVYVVLFLK ELWHLISHSF DFSEQQIMLV VLGLIDVVMI SNLLVMVIVG GYETFVSRLN LKGHPDEPEW LGHVNASVLK IKLAMAIIGI SSIHLLRTFI EAGSIGSATR TTNYTAEGVM WQTIIHTVFI LSAIGIAYVD KLSNDAVARE AHGGSHH
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