Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3431 |
Symbol | |
ID | 4023945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3814600 |
End bp | 3815208 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637963636 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_570556 |
Protein GI | 91977897 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTATC CTGATCGCTT CTATCCCGTC GTCGACAGCA TCGCGTGGGT GAAACGCCTC GCCGCGCTCG GCGTCGGCAC CGTGCAGCTC CGCGCCAAGG ACCTCGACGA CGGCGCAGCC TTGCAGCTCG TCACCGACGC GCTCGAGGCG CTGCAGGGCA CCGACACTAA GCTCGTCGTC AACGACTATT GGCGCGCGGC GATCGTCGCC GGCGCGCAGC ATCTGCATCT CGGTCAGGAA GACCTCGCCG AGGCCGACCT TCACGAAATC CGCAGCGCCG GGCTGACGCT CGGCCTCTCC ACGCATGACG ACGCCGAACT CGAAACCGCG CTGGCCGCAA GGCCCGACTA CATCGCGCTC GGCCCGATCT TCCCGACCAC GCTGAAGTCG ATGCGCTTCG CGCCGCAGGG CATTCCGAAG ATCACCGAAT GGAAGAAGCG CGCAGGCCGC ATCCCGCTGG TGGCGATCGG CGGCATCAAG CTCGAACAGG CCGAGGAGAT CTTCGCCGCC GGCGCGGATT CGATCGCGGT GGTCAGCGAC GTGACGCAGA ACCCCGACCC GGATGCGCGG GTGCGCGCCT GGCTCGACGC CGTCGCGGAG ACAGCGTGA
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Protein sequence | MPYPDRFYPV VDSIAWVKRL AALGVGTVQL RAKDLDDGAA LQLVTDALEA LQGTDTKLVV NDYWRAAIVA GAQHLHLGQE DLAEADLHEI RSAGLTLGLS THDDAELETA LAARPDYIAL GPIFPTTLKS MRFAPQGIPK ITEWKKRAGR IPLVAIGGIK LEQAEEIFAA GADSIAVVSD VTQNPDPDAR VRAWLDAVAE TA
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