Gene RPD_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3419 
Symbol 
ID4023932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3802924 
End bp3803451 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID637963624 
Productlow molecular weight phosphotyrosine protein phosphatase 
Protein accessionYP_570544 
Protein GI91977885 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACC GCATCTTCAA TGTGCTGTTT CTCTGCACAG GCAACACCGC CCGATCGATC 
CTCGCCGAAA GCATCCTGCG CAAGGATGGC GCTGGCCGAT TCAACGCCTT CTCGGTCGGC
AGCCAGCCTA AGGGCACGGT CAATCCGCTC GCGCTGAAAG TCCTTGCGGA CAGCAACTAC
CCGACCGACC AGCTTCGCTC GAAGAGTTGG CTCGAATTCG CCGCCCCGGA TGCCCCGGTG
ATGGATTTCG TGTTCACCGT CTGTGACAAC GCCGCCGGCG AAGCCTGCCC GTTATGGCCC
GGTCAGCCGA TGACGGCGCA TTGGGGTATC GACGATCCTG CGGCCGTTGA AGGCAGCGAC
ATCGAGAAGG AGCGCGCCTT CGTGCAGGCG TTCCGCTTCA TGAAAAACCG GATCTCCGTC
TTTACGGCGT TGCCGATCAA GCGGCTCGAC GGCGTTGCGC TGGGCGCGAA GCTGCGCGAG
ATCGGTCACT CGGCAGGCGC CAGCAGCGGC CGTCCGGAGG TGGCGTGA
 
Protein sequence
MSDRIFNVLF LCTGNTARSI LAESILRKDG AGRFNAFSVG SQPKGTVNPL ALKVLADSNY 
PTDQLRSKSW LEFAAPDAPV MDFVFTVCDN AAGEACPLWP GQPMTAHWGI DDPAAVEGSD
IEKERAFVQA FRFMKNRISV FTALPIKRLD GVALGAKLRE IGHSAGASSG RPEVA