Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3415 |
Symbol | |
ID | 4023928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3799890 |
End bp | 3800945 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637963620 |
Product | permease |
Protein accession | YP_570540 |
Protein GI | 91977881 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.178005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCA ACACCGTCAT CGCACCACAA CCTCGCCGTC CGTCACCAGC CTTGTGGGTC GCACTCACAG GACTGGCGCT AATTGCCTGG GGCTTGGTCT ACAGCCAGTT GCCCGCCCTG GCCGATTGGC TGGTTGGCCT GCTGCCGGTC GAGCCGTCCA GCCCGCTCGG GGCAGCGCTG CGGTTCTTCG CCTACGACAC GCCGAAAGTG TTGCTGCTGC TGACGCTGAT CGTGTTCGCG ATGGGCGTGG TGCGCAGCTT CTTCTCCGCC GAAAAGACCC GCGCCTTGCT CGCCGGCAGA CGCGAAGGCA TCGGCAACGT GCTGGCGGCT GGCCTCGGCA TTGTCACGCC GTTCTGCTCC TGCTCGGCGG TGCCGCTGTT CATCGGCATG ATCAGCGCCG GCGTGCCACT CGGCGTCACC TTCTCGTTTC TGATCTCGGC GCCGATGGTC AACGAGGTTG CGCTCGGCCT GCTGTTCGGG CTGCTCGGCT GGCAGGTGGC GCTGACCTAT CTGCTGTTCG GCCTCGCGGT CGCGATCGTC GCCGGCTGGT CGATCGGCCG TTTGCATCTC GAGCCGTGGC TCGAAGGCTG GGTCCGCGAC ATCCGCTCCG GCGCCGTCGT GCTGCCGACC GAGCATTCGT CGATCGTCGA TCGACTGCAG GCCGGCCTCG ACGCCGTGCG CGACATCGTC GGCAAGGTCT GGCCGTGGAT GATCGCCGGC ATCGCGGCCG GCGCCTTTAT CCACGGCTAT GCGCCCGCCG AACTGCTGGC CTCGCTCATG GGCCGCGACG CATGGTGGTC GGTGCCGGCG GCGGTGCTGA TCGGCATCCC CATGTATTCC AACGCCGCCG GCATCATTCC GGTGGTCGAG GCCCTGCTCG GCAAGGGTGC TGCGCTCGGC ACCGTGCTGG CCTTCATGAT GTCGGTGACG GCGTTGTCCC TGCCGGAACT GATCATCCTG CGCAAGGTGC TGACGCTGCG GTTGATCGCA GTGTTCGTCG CGGTCGTCGC GTCGGGCATC GTCGCCGTCG GCTTCCTGTT CAATGTCCTG TTCTAG
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Protein sequence | MSFNTVIAPQ PRRPSPALWV ALTGLALIAW GLVYSQLPAL ADWLVGLLPV EPSSPLGAAL RFFAYDTPKV LLLLTLIVFA MGVVRSFFSA EKTRALLAGR REGIGNVLAA GLGIVTPFCS CSAVPLFIGM ISAGVPLGVT FSFLISAPMV NEVALGLLFG LLGWQVALTY LLFGLAVAIV AGWSIGRLHL EPWLEGWVRD IRSGAVVLPT EHSSIVDRLQ AGLDAVRDIV GKVWPWMIAG IAAGAFIHGY APAELLASLM GRDAWWSVPA AVLIGIPMYS NAAGIIPVVE ALLGKGAALG TVLAFMMSVT ALSLPELIIL RKVLTLRLIA VFVAVVASGI VAVGFLFNVL F
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