Gene RPD_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3414 
Symbol 
ID4023927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3799558 
End bp3799893 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content67% 
IMG OID637963619 
ProductArsR family transcriptional regulator 
Protein accessionYP_570539 
Protein GI91977880 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.218982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.91457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATGCGCT TATCCGCATA TGCTGCAGAA CGGATGACTG ACATGGATGC GATCTCGATC 
CTGAGTGCCC TGGCCGAGCC GACGAGGCTC GCGGCGCTGC GGCTGGTCTG GGACGGCCGC
GAGCACTGTG TCTGCGAACT GATGCGGTCG CTCGGCGTGA CGCAGTCGCG GATGTCGCGG
CACATGGCAG TGCTGAAAAT GGCCGGCCTC GTCGTTGACC GCCGCGACGC GCAATGGGTG
CGCTATCGCC GTGCGCCGGA TCTGCCGCCC GAGATCGTCA GTCTGGTCGA TGCGGCGCTG
GCGCTGCCGC AAAGCCGCGA ACGGCGGGCA GCATGA
 
Protein sequence
MMRLSAYAAE RMTDMDAISI LSALAEPTRL AALRLVWDGR EHCVCELMRS LGVTQSRMSR 
HMAVLKMAGL VVDRRDAQWV RYRRAPDLPP EIVSLVDAAL ALPQSRERRA A