| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3405 |
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| Symbol | |
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| ID | 4023918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3786558 |
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| End bp | 3788144 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963610 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_570530 |
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| Protein GI | 91977871 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0282921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCAT CGACCACAGC GACAGGCGCG GCGACGCCCG AGGCGCCGTC GGAACACGTG
CCAGTCAGTC GGCTGGTCGC GTTCCTGATC ATGGTGTTCG GGATGTTCAT GTCGATCCTG
GACATCCAGA TCGTCTCGGC GTCGCTGTCC GAGATTCAGG CGGGACTCTC CGCCAGCTCC
AGCGAAGTCT CCTGGGTGCA GACCTCGTAT CTAATCGCCG AAGTCATCGC GATCCCGTTG
TCGGGCTTCC TGTCGCGCGC ACTCGGCACC CGCAACCTGT TCGCGATCTC GGCGGCCGGC
TTCACCTTCG CCAGCCTGAT GTGCGGCTTC ACGTCGACGA TCACCGAGAT GATCGTCTGG
CGCGCGATCC AGGGCTTCCT CGGCGCCGGC ATGATCCCGA CCGTGTTCGC CTCGGCCTAT
ACGGTGTTTC CGCGTAGCAA GTTCAATCTG GTCGGGCCGA TCATCGGCCT CGTCGCGACG
CTGGCGCCGA CCATCGGTCC CACGGTCGGC GGCTACATCA CCGACCTGAT GTCGTGGCAC
TGGCTGTTCT TCATCAACAT CGTGCCGGGC ATCGGCATCA CCATCGGCGT GCTGGCGCTG
GTCGATTTCG ACGAGCCGCA TTACGAACTG CTCGATCATT TCGACTGGTG GGGGCTCGGC
TTCATGGCCG GCTTCCTCGG TTCGCTCGAA TACGTGCTCG AGGAAGGCCC GCGCAACGAC
TGGTTCAACG ACGAGTCGAT CCTGATTTTC GCGATCGTCT GCGTGGTTTC CGCGGTGGCG
TTTTTCTGGC GGGTGCTGAC GGCGCGCGAG CCGATCGTCG ATATCCGCGC CTTCACCAAC
CGCAACTTCG CGTTCGGCTG CATGTTCTCG TTCTGCGTCG GGATCGGGCT CTACGGGCTG
ACCTACATCT ATCCGCGCTA CCTCGCCGAA GTGCGCGGCT ACAGCGCGCT GATGATCGGC
GAGACGATGT TCGTCTCCGG CATCGCGATG TTCCTCACGG CGCCGCTGGT CGGCCGGCTG
ATGGCGCTGA TCGATATGCG GATCCTGATC GCGATCGGCC TGTTGCTGTT CGCCGGCGGC
ACCTGGCAGA TGACCTGGAT CACCCGCGAC TACGATTTCT ACGAGCTGTT GTGGCCGCAG
ATCTTCCGCG GCGTCGGCAT GATGATGGCG ATGGTGCCGG TCAACACCAT CTCGCTCGGC
ACGCTGCCCG CCGCGCGGGT GAAGAACGCC TCCGGCCTGT TCAACCTGAC CCGCAATCTC
GGCGGCGCGC TCGGCCTCGC GCTGATCAAC ACCGCGCTCG ACGGCCGCAC CGACTTTCAC
ATCTCGCGAC TGCACGACAA GGTCACCTGG GGCAACGCGC AGGCGGTCGA TTTTCTCAAC
ATGCTGACCC AGCGCTTCCA GGGCCTCGGC GACGCTTCGA TGATGGCGCT GAAACAGTTC
AACCAGATCG TCCACCGCCA GGCGGTGACG ATGAGCTTCG GCGACACCTT CTTCATGCTG
ACGTTCTTCT ATGTCGGGCT GAGCACGCTG GTGTTCCTGC TCGCCAAGCC GGCGAACCCG
ATGGTGGCGG CAGAGGGCGG GCATTGA
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| Protein sequence | MSASTTATGA ATPEAPSEHV PVSRLVAFLI MVFGMFMSIL DIQIVSASLS EIQAGLSASS
SEVSWVQTSY LIAEVIAIPL SGFLSRALGT RNLFAISAAG FTFASLMCGF TSTITEMIVW
RAIQGFLGAG MIPTVFASAY TVFPRSKFNL VGPIIGLVAT LAPTIGPTVG GYITDLMSWH
WLFFINIVPG IGITIGVLAL VDFDEPHYEL LDHFDWWGLG FMAGFLGSLE YVLEEGPRND
WFNDESILIF AIVCVVSAVA FFWRVLTARE PIVDIRAFTN RNFAFGCMFS FCVGIGLYGL
TYIYPRYLAE VRGYSALMIG ETMFVSGIAM FLTAPLVGRL MALIDMRILI AIGLLLFAGG
TWQMTWITRD YDFYELLWPQ IFRGVGMMMA MVPVNTISLG TLPAARVKNA SGLFNLTRNL
GGALGLALIN TALDGRTDFH ISRLHDKVTW GNAQAVDFLN MLTQRFQGLG DASMMALKQF
NQIVHRQAVT MSFGDTFFML TFFYVGLSTL VFLLAKPANP MVAAEGGH
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