| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3399 |
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| Symbol | murE |
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| ID | 4023911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3777717 |
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| End bp | 3779189 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637963604 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_570524 |
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| Protein GI | 91977865 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.700473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCC GCGATCTCTT CAGCGACGAC GCCCCGATCG ACGCACAGGG CTCGCCGCGC
GGCGCCGCCG ATCTCGATGT CGGCGGCCTT GCGGTCGACA GCCGCGCGGT GAAGCCGGGC
GATCTGTTCT TTGCGCTGGC CGGGGCGAAG ACCGACGGCG CACGCTTCAT CGCCGCTGCG
ATCGCCGCCG GCGCGGTCGC GGTCGCCGGC GATCATGCGC CGGATGGCGA ACTCGCCGTG
CCGTTCGTGC CCCTCGGCAA TCCGCGCCGC GCGCTGGCGC TGGCCGCCGC GCGATTCTAT
TCGCGACAGC CGCGAACCAT CGCCGCGGTG ACCGGGACCA GCGGCAAGAC CTCGGTCGCG
GCGTTCACCC GGCATATCTG GCAACGGCTC GGACACGCTG CGGCAAGCAT CGGCACCATC
GGCCTGGTCA CCCCGACGCG CAGCGTCTAC GGTTCACTGA CAACGCCGGA CCCGATCGCG
CTGCATCGCT CGCTCGACGA GATCGCCGGC GAAGGCGTCA CGCATCTGGC GCTCGAAGCC
TCATCGCACG GGCTCGATCA GTTCCGGCTC GACGGCGTTC GCGTCGCGGC CGGCGGCTTC
ACCAATCTGT CGCGCGACCA TATGGACTAC CATCCGGACG TCGCGCACTA CCTCAACGCC
AAGCTCCGGC TGTTTCGCGA TCTGGTGATC GACGGCGGGG CCGCGGTGAT TTCCGCTGAC
CACGACTGTT CGGCGCAAGT GATCGACGCC GCACGTGCGC GAGGGCTGCG GCTGATCACC
GTTGGCCGCA ACGGCGACGC AGGCGAGGGC ATCCGGCTGA TCGAGGCGTC GATCGACGGC
TTCGCGCAGA AGCTCACGAT CGAACATGCC GGCCGCCGCA CCGCGGTGCA TCTGCCGCTG
GTCGGCGAAT TCCAGATCGA GAACGCGCTG GTCGCGGCCG GGCTGGTGAT CGGCGCCGGC
GGCGATCCGG CGGCGGCGTT CGCGGCGCTG GATCATCTCG AGGGCGCCCC GGGCCGGCTC
GATTTCGTCG GCGAGCGCCG CGGCGCGCCG GTGTTCGTCG ACTACGCGCA CAAGCCTGAT
GCGCTGGCGA AGGCGCTGCA GGCGCTGCGG CCCTACGCGA AGCGCAAGCT CGTCGTGGTG
TTCGGCGCCG GCGGCGATCG CGACGCCGGC AAGCGGCCGC TGATGGGCGC GATCGCAGCC
GGGAACGCCG ACAGCATCAT CGTCACCGAC GACAATCCGC GCAGCGAAGA CCCTGCCGCA
ATCCGGGCCG CCATCCTCGC CGCCGCGCCG GGAGCGCGCG AGATCGGGGA TCGCGCCGAA
GCGATCCGCA CCGCGATCGC CGCGCTGGCG CCGGGCGATG CGCTGCTGAT CGCCGGCAAG
GGCCATGAGA CCGGGCAGAT CGTGCGCGAC ACGGTGCTGC CGTTCAGTGA TCACGAAGCC
GCCGCGGCGG CGTTGTCGAC GAGTGCCGGA TGA
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| Protein sequence | MKLRDLFSDD APIDAQGSPR GAADLDVGGL AVDSRAVKPG DLFFALAGAK TDGARFIAAA
IAAGAVAVAG DHAPDGELAV PFVPLGNPRR ALALAAARFY SRQPRTIAAV TGTSGKTSVA
AFTRHIWQRL GHAAASIGTI GLVTPTRSVY GSLTTPDPIA LHRSLDEIAG EGVTHLALEA
SSHGLDQFRL DGVRVAAGGF TNLSRDHMDY HPDVAHYLNA KLRLFRDLVI DGGAAVISAD
HDCSAQVIDA ARARGLRLIT VGRNGDAGEG IRLIEASIDG FAQKLTIEHA GRRTAVHLPL
VGEFQIENAL VAAGLVIGAG GDPAAAFAAL DHLEGAPGRL DFVGERRGAP VFVDYAHKPD
ALAKALQALR PYAKRKLVVV FGAGGDRDAG KRPLMGAIAA GNADSIIVTD DNPRSEDPAA
IRAAILAAAP GAREIGDRAE AIRTAIAALA PGDALLIAGK GHETGQIVRD TVLPFSDHEA
AAAALSTSAG
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