| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3385 |
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| Symbol | lpxC |
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| ID | 4023897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3759189 |
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| End bp | 3760151 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963590 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_570510 |
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| Protein GI | 91977851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0558805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0242454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTTCA GCCGGCAGAC AACGCTGCGT TCGCAAGCCA CGGTGACGGG CGTAGGTGTA
CATTCCGGTC GTCCCGTCAA TCTCACCATC GGGCCCGCAT CGATCGATGC GGGTTATATT
TTTGTCCGCA CCGGTCTCGA CGGCGGCGAC CGCGAAATCC AGGCCAACGC CAAATCGGTG
GTCGCCACCG AACTCGCCAC CGTGCTGGGC GATAGCGACG GCCCGCTGGT TTCGACGGCC
GAGCACGTTC TCGCCGCGCT GCGCGGCATG GGCGTCGACA ACGCCACGAT CGAGGTCGAT
GGTCCCGAAG TTCCGATCAT GGACGGCAGC GCCGCTCCCT TCGTCGCCGC GATCGATCAG
GCCGGCGTCC GCGAACAGTC CGCGCCGCGC CGCTTCATCC AGATTCTCAA ACCGGTCCGC
GTATCGCACG GCGATTCGTT CGGCGAGCTT CGGCCCTATG CCGGCGGCTT CCGCGTCGAG
GTCGAGATCG ACTTCGCCAA TCCGGTCATC GGCCGGCAGA ATTATACCCT CGGCGTCGAG
CCGGAGGCCT TCCGCCGCGA AATCGCCCGC GCCCGCACCT TCGGCTGCAT GAGCGACGTC
GCCCGGCTGT GGGAGATGGG TTACGCGCTC GGTGCGTCGT TCGAGAACTC CGTGGTGTTC
GACGACGAGC GGCTGCTGAA TGCCGAAGGC CTGCGCTATG CCGACGAATG CGCCCGCCAC
AAGCTGCTCG ACGCGATCGG CGATCTGGCG CTGGCCGGTT TGCCGATTTT GGGCGCCTAT
CGCTCGATGC GGGGCGGCCA CAAGCTGAAC CATTCGGTGC TGACCGCGCT CCTGGCCGAT
CGCACCAATT TCCGGGTGAT CGAGGCCGAG ACGACGCGCC GCGCGGTGCG CGGGCACGCC
GAGGCCGTCA CCCGCCTGGC CGGCGGCATG GTTGCCCCGG CCTATGGCCC GGACATGTCC
TGA
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| Protein sequence | MKFSRQTTLR SQATVTGVGV HSGRPVNLTI GPASIDAGYI FVRTGLDGGD REIQANAKSV
VATELATVLG DSDGPLVSTA EHVLAALRGM GVDNATIEVD GPEVPIMDGS AAPFVAAIDQ
AGVREQSAPR RFIQILKPVR VSHGDSFGEL RPYAGGFRVE VEIDFANPVI GRQNYTLGVE
PEAFRREIAR ARTFGCMSDV ARLWEMGYAL GASFENSVVF DDERLLNAEG LRYADECARH
KLLDAIGDLA LAGLPILGAY RSMRGGHKLN HSVLTALLAD RTNFRVIEAE TTRRAVRGHA
EAVTRLAGGM VAPAYGPDMS
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