Gene RPD_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3369 
Symbol 
ID4023881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3739023 
End bp3739490 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content64% 
IMG OID637963574 
Producthypothetical protein 
Protein accessionYP_570494 
Protein GI91977835 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00368888 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGCCA GATCCCGAGG TCGCCGACTA CATCCGAATT ACATCGTCGC CTCGATCGGA 
GGTGAACAAG AAGCCGCCAT GGTTCACTAC GTCGCCTTGA TCCATCTGGA CGCCGATGGC
AGCTACCGCG TGTCGTTTCC CGACATTCCC GGGGTCGTCA CCGCCGGCGA GACGATCGAG
GAAGCCGAGG AGGAAGCCGC CGAGCTTCTC GCCTTCGCGG CCGAGGACCC GGACGGCGCG
ATCGTGTTCA ATCAGCCGCG TACGATTGAC GAACTGAACA AGGATCCGGC CTTCGTCGCC
GCGAGTAAGG ACGCGATCGG CGCGCTGATG AATACCTCGC GTAGGCACGC GACACCGACT
AGCCAACGCC GTCATGGCCG GGCTTCGTCC CGGCCAGCCA CGTCTTGTTT GCGGCAGGCG
TTGAAGGCGT GGATGCCCGG GTCAAGCCCG GGCATGACGG GTCAGTGA
 
Protein sequence
MHARSRGRRL HPNYIVASIG GEQEAAMVHY VALIHLDADG SYRVSFPDIP GVVTAGETIE 
EAEEEAAELL AFAAEDPDGA IVFNQPRTID ELNKDPAFVA ASKDAIGALM NTSRRHATPT
SQRRHGRASS RPATSCLRQA LKAWMPGSSP GMTGQ