Gene RPD_3359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3359 
Symbol 
ID4023871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3724150 
End bp3724734 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content64% 
IMG OID637963564 
Producthypothetical protein 
Protein accessionYP_570484 
Protein GI91977825 
COG category[S] Function unknown 
COG ID[COG3814] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.363359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0103184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCATC CGAGCGACCG GACAAGGCGG ACACAGGACA AGGCGGACAC AGGACAATTC 
ATGGCCACCG ATCACATCCG ATACGACGTC CTCGCGCGGG AAGCATTGCG TGGCGTGCTG
CGGCAAGTCC TGACCGACGT CGCTCAGCAC GGTCTGCCGG GCGAGCATCA TTTCTTCATC
ACCTTCCTGT CCAAGGCCGA CGGCGTGAGG CTGTCGACGC GACTGCTCGC GCAGTACCCC
GAGGAAATGA CGGTGATCTT GCAGCACCAG TTCTGGGATC TGGTGGTGAC CGAGGATCGC
TTTGAGGTCG GACTATCGTT CGGCGGCATC CCGGAGCGGC TGGTGGTGCC GTTCTCGGCG
ATCAAGAGCT TCTTCGATCC GTCCGTGCAG TTCGGCCTGC AGTTCGAGAC CAATGAAGGC
GCTGCTGAAA CCGCCGACGC CAGCGCTCCG GAGATCGCAG CGCCGGCGGC GACCCCTGCC
ATGCTGGCGG CGACCGAGTC TGCTCCGACC GACGCTGGCG ACGAGGAGCC GGTGAAGTCC
GAGGGCGCCG AGGTGGTGCG GCTCGACCGG TTCCGCAAGA AATAG
 
Protein sequence
MKHPSDRTRR TQDKADTGQF MATDHIRYDV LAREALRGVL RQVLTDVAQH GLPGEHHFFI 
TFLSKADGVR LSTRLLAQYP EEMTVILQHQ FWDLVVTEDR FEVGLSFGGI PERLVVPFSA
IKSFFDPSVQ FGLQFETNEG AAETADASAP EIAAPAATPA MLAATESAPT DAGDEEPVKS
EGAEVVRLDR FRKK