| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3355 |
|---|
| Symbol | |
|---|
| ID | 4023866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3718823 |
|---|
| End bp | 3719836 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637963560 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_570480 |
|---|
| Protein GI | 91977821 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00368888 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTGT TTGCGCGTGG GGTCGCGTTC AGGCGCGTTG CCGCTATTGG CGGACTTGTT
GTCGCGCTTG CTGCGACCCT CCTATTCGGA CCTGCAATTA GTCAGGAGCA GGCCAGCTAT
CCGTCGCGCC AGATCAAGCT GATCGTGCCG TTCGCCAAGG GCGGACCGAC CGACGTGGTG
GCGCGGATCG TCTCCGCCGA GATGGCGAAG ACACTGGGTC AGCCGATTTC AATCGATAAC
ATCGTCGGCG CCGGGGGCAC CGCCGCCACG CTACGGGTGG CCCAGGCGGC GCCCGACGGC
TATACGCTGA TCGTCGGCCA CATGGGCACC CATGCCGCGG CTGCCGCGCT CTATCCAAAA
CTCGGCTACC ACCCGGATAC AGATTTCGCG CCGGTGGCGC TGGTGACACG GATGCCGGTA
CTGCTGCTGG CCCGGCGGGA GTTTCCCGCG GCAAATTTCG GTGAGTTTGT CGCCTATGTG
CGACGTCATC CTGATAACGT CAATTTGGCC CATGCCGGCG TCGGTTCGGT GTCCTACGCA
TCGTGCATGC TGCTCAACTA TCTGATCGGC ATCAATCCCA CAGGCGTTCC GTTCAACGGA
ACGGGACCGG CGATGGATGC GCTGGTCGCC GGACAGGTCG ATTTCATGTG CGATCAGATC
GTCAATGCGG TTCTGCCGCT GCGCACCGAG GTGATCAAGG CCTATGCGAT CGCCAGTCCA
GAACGTGACG CGGTGGTGCC CGCGGTGCCG ACCTCCGCTG AAGCCGGCTT GCCAGGCTTT
CAGGTCGAGG CCTGGAACGC GATCTTCGCG CCGAAGGGGA CACCGCAGGA GATCGTTGCC
AATCTCAATG CAGCCGTGGT GCGGGCGCTG GACCAACCCG AGGTCCGCGC CCCCCTGACC
GCCCTCGGCG GCATTGTTCC GACGCGGGGG CAGCGCACGC CGGAAGCTTT AGCGGCGCTC
GTGCGCAGCG ACTTGCAGAA ATGGGGAGAG GTGCTGAAGC GGCAGGTGCC CTGA
|
|---|
| Protein sequence | MHLFARGVAF RRVAAIGGLV VALAATLLFG PAISQEQASY PSRQIKLIVP FAKGGPTDVV
ARIVSAEMAK TLGQPISIDN IVGAGGTAAT LRVAQAAPDG YTLIVGHMGT HAAAAALYPK
LGYHPDTDFA PVALVTRMPV LLLARREFPA ANFGEFVAYV RRHPDNVNLA HAGVGSVSYA
SCMLLNYLIG INPTGVPFNG TGPAMDALVA GQVDFMCDQI VNAVLPLRTE VIKAYAIASP
ERDAVVPAVP TSAEAGLPGF QVEAWNAIFA PKGTPQEIVA NLNAAVVRAL DQPEVRAPLT
ALGGIVPTRG QRTPEALAAL VRSDLQKWGE VLKRQVP
|
|---|
| |