| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3351 |
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| Symbol | |
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| ID | 4023862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3715081 |
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| End bp | 3716016 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963556 |
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| Product | HflC protein |
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| Protein accession | YP_570476 |
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| Protein GI | 91977817 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.713706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.149829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGG GAATCGCAGG CATCGTTGCG CTGATCTTGC TGCTGGTCGC GGTCATCGTC
GGCTGGTCGT CGATCTTCAC CGTCAGCCAG ACCGAGCAGG TGCTGCTCGT TCGACTCGGC
GAGCCGGTAC GCGTCGTCAC TGAACCGGGC CTCAACTTCA AGGCCCCGTT CATCGACACC
GTGATCAGCA TCGACAAACG GATTCTCGAT CTCGAAAATC CGTCTCAGGA AGTGATCGCC
TCGGACCAGA AGCGGCTCGT GGTCGACGCT TTCGCGCGCT ATCGGATCAA GAACGCGCTC
CGGTTCTATC AGAGCATCGG ATCGATCCCG GCCGCCAACA TCCAGCTGAC GACGCTGCTC
AACGCATCGC TGCGTCGTGT GCTCGGCGAG GTCACGTTCA TCCAGGTCGT CCGTGACGAG
CGCGAAGGGC TGATGCAGCG GATCCGCACC CAGCTCGACC GCGAGGCCGA TGGCTACGGC
ATTTCGGTGG TCGACGTCCG TATCCGCCGC GCCGATCTGC CGGAGCAGAA CAGCCAGGCG
GTGTATCAGC GGATGCAGAC CGAACGTCAG CGTGAGGCTG CCGAGTTCCG CGCGCAGGGC
GGACAGAAGG CGCAGGAGAT TCGCTCGAAG GCGGACCGAG AAGCGACCGT GATCATCGCC
GAGGCGAACT CGCAGGCCGA AGAAATCCGC GGTTCCGGTG ACGCCGAGCG TAACCGGCTG
TTCGCGACGG CCTACAGCAA GGATCCGGAC TTCTTCGCGT TCTACCGGTC GATGACGGCC
TATGACCAGG CGTTGAAATC CTCCGACACC CGCTTCCTGC TGAGACCGGA TTCCGAGTTC
TTCCGCTTCT TCGCCAATCC GAGCGGCAAG ACCGCAGCGC GGCCGACGAC TACGGCTGCG
CCTGCGGCTC CCGAGCCGGC TGCTGCGCCG CGATAA
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| Protein sequence | MKAGIAGIVA LILLLVAVIV GWSSIFTVSQ TEQVLLVRLG EPVRVVTEPG LNFKAPFIDT
VISIDKRILD LENPSQEVIA SDQKRLVVDA FARYRIKNAL RFYQSIGSIP AANIQLTTLL
NASLRRVLGE VTFIQVVRDE REGLMQRIRT QLDREADGYG ISVVDVRIRR ADLPEQNSQA
VYQRMQTERQ REAAEFRAQG GQKAQEIRSK ADREATVIIA EANSQAEEIR GSGDAERNRL
FATAYSKDPD FFAFYRSMTA YDQALKSSDT RFLLRPDSEF FRFFANPSGK TAARPTTTAA
PAAPEPAAAP R
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