Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3348 |
Symbol | |
ID | 4023859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3712360 |
End bp | 3713022 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637963553 |
Product | hypothetical protein |
Protein accession | YP_570473 |
Protein GI | 91977814 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.870462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.145853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGA TCAGCCGCTC CGCGCTCGCC GTCGATTTCG TCGGCGGCGC GGTCGGCTAC AAGCTACGCT CCGGCGCAGC CCGCAGTCAC GCTCTCCTCA AGGCGACCGG CGTTTCTGCG AATCGTCCGC TGCATGTGAT CGATGCCACC GCGGGGCTCG GTCGCGATTC CTTCCTGCTC GCCTCGATGG GCGCGACGGT GACGCTGATC GAGCGCTCGC CGCAGGTCCA CGCGCTGCTC GCGCAAGGGC TCGAGGCCGC GCGGGCGGAG AGCGACGAGA TCGCCGCCAT CGTCGCGCGA ATGACGCTGA TCCACGGCGA TGCGCGCGCG TTGCTGCCGA CCTTGCAGGC CGATGTGGTG ACGGTCGATC CGATGCATCC GGCACGGACC AAGACGGCGC TGGTGAAGCA GGAGATGCGT CTGCTGCGCG AGATGGTCGG CGCCGATCCG GACGTCGCCG ACTTGATGCA GGCGGCGCTG GTCGCGCGCT GCGGCCGCGT CGTGCTGAAA TGGCCGCTGC GCGCCGAGCC GCTCGCAGGC ATCCGCAAGC CGTCCTACCA GATCGCCGGC AAGACGGTGC GCTACGACGT GTTCGTGAAT CCGCGCGCTC CGGCTGAAGA GGCTTTGCCG CGCGCGGACG ATCTCGCGCT TTTCCGGTTC TGA
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Protein sequence | MSAISRSALA VDFVGGAVGY KLRSGAARSH ALLKATGVSA NRPLHVIDAT AGLGRDSFLL ASMGATVTLI ERSPQVHALL AQGLEAARAE SDEIAAIVAR MTLIHGDARA LLPTLQADVV TVDPMHPART KTALVKQEMR LLREMVGADP DVADLMQAAL VARCGRVVLK WPLRAEPLAG IRKPSYQIAG KTVRYDVFVN PRAPAEEALP RADDLALFRF
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