Gene RPD_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3348 
Symbol 
ID4023859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3712360 
End bp3713022 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID637963553 
Producthypothetical protein 
Protein accessionYP_570473 
Protein GI91977814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.870462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.145853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA TCAGCCGCTC CGCGCTCGCC GTCGATTTCG TCGGCGGCGC GGTCGGCTAC 
AAGCTACGCT CCGGCGCAGC CCGCAGTCAC GCTCTCCTCA AGGCGACCGG CGTTTCTGCG
AATCGTCCGC TGCATGTGAT CGATGCCACC GCGGGGCTCG GTCGCGATTC CTTCCTGCTC
GCCTCGATGG GCGCGACGGT GACGCTGATC GAGCGCTCGC CGCAGGTCCA CGCGCTGCTC
GCGCAAGGGC TCGAGGCCGC GCGGGCGGAG AGCGACGAGA TCGCCGCCAT CGTCGCGCGA
ATGACGCTGA TCCACGGCGA TGCGCGCGCG TTGCTGCCGA CCTTGCAGGC CGATGTGGTG
ACGGTCGATC CGATGCATCC GGCACGGACC AAGACGGCGC TGGTGAAGCA GGAGATGCGT
CTGCTGCGCG AGATGGTCGG CGCCGATCCG GACGTCGCCG ACTTGATGCA GGCGGCGCTG
GTCGCGCGCT GCGGCCGCGT CGTGCTGAAA TGGCCGCTGC GCGCCGAGCC GCTCGCAGGC
ATCCGCAAGC CGTCCTACCA GATCGCCGGC AAGACGGTGC GCTACGACGT GTTCGTGAAT
CCGCGCGCTC CGGCTGAAGA GGCTTTGCCG CGCGCGGACG ATCTCGCGCT TTTCCGGTTC
TGA
 
Protein sequence
MSAISRSALA VDFVGGAVGY KLRSGAARSH ALLKATGVSA NRPLHVIDAT AGLGRDSFLL 
ASMGATVTLI ERSPQVHALL AQGLEAARAE SDEIAAIVAR MTLIHGDARA LLPTLQADVV
TVDPMHPART KTALVKQEMR LLREMVGADP DVADLMQAAL VARCGRVVLK WPLRAEPLAG
IRKPSYQIAG KTVRYDVFVN PRAPAEEALP RADDLALFRF