Gene RPD_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3347 
Symbol 
ID4023858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3711803 
End bp3712270 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content62% 
IMG OID637963552 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_570472 
Protein GI91977813 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.351306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.14056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA AGCCCCTGCA CACGCTGCGC CCGCTGGAGC GCGCGGACCT CGAGAAGATC 
GGCTGGATGG AAGCCGAGAT CGCCAAGATC TCGTTTCCGG ACGATCCGAT CACCGACGTC
GCCTTCTATG TGAAGAAGCT GGAGAAGCTG TTCGGCGACA AGGAAGCCGC CACCTTCGTC
GCCGAGCGCG ACGGCGAGAT CGTCGGCTGG TCCTATGTCA GCATCCGCCG CAACTTCATC
ACCAAGCAGC CCTATGGCGA CTATCACAGC ATCTACATCG ATCCGTCGCA GCGCGGCTCG
GGGCTGTCGA ACCTGCTGAT GAACTCGGTG TTCGATTGGT GCAGGGCGCA GGATCTCGGC
CACGTGGTGT TCCGCACCCG CGCCACCAAC GAGCCGATGA AGGGCGTGCT GGCGCGCGTC
GGTTTCGTGC CGACGCAGAT CTATCTGGAA AAACCGCTCA AGGATTGA
 
Protein sequence
MNDKPLHTLR PLERADLEKI GWMEAEIAKI SFPDDPITDV AFYVKKLEKL FGDKEAATFV 
AERDGEIVGW SYVSIRRNFI TKQPYGDYHS IYIDPSQRGS GLSNLLMNSV FDWCRAQDLG
HVVFRTRATN EPMKGVLARV GFVPTQIYLE KPLKD