| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3343 |
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| Symbol | |
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| ID | 4023854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3708045 |
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| End bp | 3709316 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963548 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_570468 |
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| Protein GI | 91977809 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.141208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCCA GATACGCCAC GCGCCTTGCG TGTGCGGCTG CGTTGCTTGT CGGCTGTTTG
CTGACAGGTG TCGCGCATTC GCAAACCCTC ACCATGGGGG CAGCGCTTCA GCGCGCGCTC
GCGACAAGTC CACGGCTGAC GGCTGCCGAG CGCAACGTCG GCATCGCGCG GGGGCAGCGC
ATCCAGTCCG GAGCGTTGAT CAACCCGGAG ATATCCTACG ATCAGGACGA CTCCTTCGGC
TCCGGAGCCT ACCGGGGAAC GCGATCGGCG GAGTCGGCGC TGCAGATCAG TCAGATGTTC
GAGCTCTGGG GCAAGCGAGA CGCACGCATC GCGGCCGGGC AGGCCGGTCT CGATACGGCG
GCGATCGAGC GCCAGGCGGT GCGGCTCGAA GTGCTGTCCG AGGCGGCGAT CGCGTTCCTC
AACGTGCTCG GTCTGCAGCG CAGGATCGAG ATCCTCGACG AACAGGTCGA CGCCATCGAC
AAGCTGACGC CGCTGCTGCA GCGACGCGTC GATGCGGGCG CCTCGTCGAT CGCGGAAACC
GGGCGGGCCG AAGTGGCCTC GGCTCTGGTC AAGGCCGATC GCGAGCGTAC CAAAGCATCG
CTTGCGACGG CGCGTCGCGA ACTCGCGATC CTGATCGGAG ACACCGCTCC GAAGTTCAGC
GCGGTGTCCG GGCGGCTGGA CGCGATCGGT CGCCCACCGT CTTTCCAGGC CGTGGTCGCG
GCGATCGATG CGAATCCGCA ACTGGTTCGA TGGCAGGCGA TCTACGCGCA ACGCAACGCG
CAGCTGATAC TCGCGCGTCT GAAGCCCTAT CCGGACGTGA ACCTCTCGGT CGGCTGGCGC
CGATACAACG AGACCGGTGA CAATGCCGTG CGTCTCGCCG TCTCGGTGCC GATCCCGCTG
TTCGACCAGA ACCAGGGCAA CATCCTGTCG GCGCAGGAGA GCCTTGCCAA AACCGCGGCC
GAGCGGAAGG CCAACCGGAA TACGCTGATC GTCGTGGCGG GACGCGCTTA CGACACGCTG
CAGGGGTCGC TGCGCGAACT TGCGATCCTG CGCGAGACCG GCATTCCGAA AGCGCGAGAC
GCTTCCGCTG CGATCTTCGA AGGGTACGGG CAGGGCCGCT ACTCGCTTCT CGAGGTTCTG
GACGCGCAGG CCAGCGTCGC CCTGGCCCGC CTGCGTGAAC AAGAAGCCCA GCAGAATTTC
CACGTCGCCG TCGCCACCAT CGAGGGGCTG GTCGGCAACC CATTTGCATT GGCTCGGGGG
AGCGCGCGAT GA
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| Protein sequence | MLSRYATRLA CAAALLVGCL LTGVAHSQTL TMGAALQRAL ATSPRLTAAE RNVGIARGQR
IQSGALINPE ISYDQDDSFG SGAYRGTRSA ESALQISQMF ELWGKRDARI AAGQAGLDTA
AIERQAVRLE VLSEAAIAFL NVLGLQRRIE ILDEQVDAID KLTPLLQRRV DAGASSIAET
GRAEVASALV KADRERTKAS LATARRELAI LIGDTAPKFS AVSGRLDAIG RPPSFQAVVA
AIDANPQLVR WQAIYAQRNA QLILARLKPY PDVNLSVGWR RYNETGDNAV RLAVSVPIPL
FDQNQGNILS AQESLAKTAA ERKANRNTLI VVAGRAYDTL QGSLRELAIL RETGIPKARD
ASAAIFEGYG QGRYSLLEVL DAQASVALAR LREQEAQQNF HVAVATIEGL VGNPFALARG
SAR
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