| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3341 |
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| Symbol | |
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| ID | 4023852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3703762 |
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| End bp | 3706974 |
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| Gene Length | 3213 bp |
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| Protein Length | 1070 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963546 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_570466 |
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| Protein GI | 91977807 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.197745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACG CCATTCTGGA GTTCTCCATT CGCCAGCGCT GGTTGGTGAT GATCGGCGTG
CTGGCCGTCG CCGCGTTCGG CGCCTGGAAT TTCACCCGGC TGCCGATCGA CGCGGTGCCC
GACATCACCA ACGTGCAGGT GCAGGTCAAC GTCGAAGCCC CGGGGTATTC GCCGCTCGAG
GTGGAGCAAC GCATCACCTT TCCGGTCGAG ACCGGCATGG GCGGGATTCC AAACCTGCAA
TATACGCGCT CGCTGTCGCG CTACGGCCTC AGCCAGGTCA CGATCGTCTT CAACGAAGGG
ACGAGCATCT TTTTCGCCCG CCAGCAGGTC AGCGAGCGGC TCCAGCAGGT CAAGGATCAG
CTTCCGAGCG GCATCGAAAT GGCGATGGGT CCGATCTCCA CGGGCCTCGG CGAGATCTAC
ACGTTCGCGC TCGACGCCAG GCCGGGCGCC AAGAATGCCG ACGGTTCGCC GGTCACGCCG
ATCGATCTGC GTACCGTGCA GGACTGGATC ATCAAGCCCC AGCTCAGGAC GGTGCCGGGC
GTCGTCGAGG TCAACACCAT CGGCGGCTAT GAGAAGCAGT TCCACGTGCT GCCCGACCCC
AGCAAGCTGA TGGCGTTCCG TCTCGGCTTT CGCGACGTGA TGACGGCGCT GGCGGCGAAC
AATGCGAATG TGGGCGCGGG CTACATCGAG AGGAACGGCG AACAATATCT CGTTCGCACG
CCGGGCCAGG TGACGAATAT CGACGATATC CGCGGCGTGG TGGTCGGAAC GCGTGGCGGC
GTGCCGGTTC GTATCAGCGA CGTGGCGGAG GTGCAGATCG GGACGGATCT GCGAACGGGC
GCTGCTACGC TCGACGGCAG GGAGACGGTG CTCGGCACCG CAATGCTTCT GATCGGGGAG
AACAGCCGAA CGGTCTCGCA GCGGGTGTCG GCGAAGCTGG ACGACATCGC CAGATCGCTT
CCGGAAGGCA TATTCGCGCG CGTGCTCTAC GACCGCACGG TGCTGGTCGA CGCGACCATC
GCCACCGTCG AGAAGAACCT CGTCGAAGGC GCGCTGCTCG TCATCGTGAT CCTGTTTCTG
ATCCTGGGCA ATTTCAAAGC CGCCATCGCG ACCGCGCTGG TAATCCCGCT GTCGATGCTG
ATCACCATCA CCGGCATGGT CGAGAGCAAG GTCAGCGCCA ATCTCATGAG CCTCGGCGCC
ATCGATTTCG GCATCATCAT CGACGGCGCG GTGATCATCG TCGAGAACTG CCTGCGCCTT
CTGGCGGTGG AGCAGCACAG ACGAGGCCGG CTGCTCACGC GTGACGAGCG GTTCGCCACC
ATTCTCGCGG GCTCCCGGGA GGTCATCAAG CCGAGCTTGC TGGGCACGCT GATCATCGCG
GTGGTGTACC TGCCGGTGCT GACCCTCACC GGCGTCGAGG GCAAGATGTT CACCCCGATG
GCGTTGACGG TGCTGATGGC GCTCGCCGGC GCGTCGATCC TGTCGATGAC CTTCGTACCC
GCAGCGGTCG CGCTGCTGGT AACCGGAAAG GTCACCGAAA AGGAGAACTT CTTCATGCGC
GGCGCGCGGC GGATCTATCT GCCGCTGCTC GGCCTTGCCA TCCGTCACCG CGGCATCGTG
GCGACGCTCG CCGTCGTGCT GCTTCTGGTC AGCGGATATG CCGCCTCCAG AATGGGCGGT
GAGTTCATTC CGAGCCTCGA CGAAGGCGAC ATCGCGATGC ACGCGATGCG GATTCCGGGA
ACCAGCCTGA CGCAGGGCAT CGACATGCAG TTGAAGCTGG AGAAGGCGCT TCTGCAATTG
CCGGAGGTGA AGGAGGTGTT CTCCAAGCTC GGTACGTCCG AAGTGGCCAC CGATCCGATG
CCGCCGAACG TCGCCGATAC GATCATCATG CTGAAGCCGC GCGCGGAATG GCCCGATCCG
AAGCGGAGCA AGGCGGATCT CGTGGCGGCG GTCGAGAAAC AGGCCGAGAC GCTGCCGGGC
AACGTCTATG AGCTGACCCA GCCGATTCAG ATGCGGTTCA ACGAACTGAT CTCGGGCGTC
CGCAGCGACG TCGGCGTCAA GATCTTCGGC GACGATTTGG ATACGCTGCT CGAGGTCGCG
GGGCGGGTTC AGACGGTGTT GCAGGCCGTG CCCGGCGCCG CCGACGTGAA GACCGAGCAG
ACCGCGGGCC TGCCGGTGCT CACTGTGAAG CTCGACCGAC CGGCGCTGTC GCGATTGGGA
TTGAGCGTGA CGGACGTTCA AGGTCTCGTG GAGACGGCGG TCGGCGGCAA AAGCGCCGGT
CTCGTCTTCG AAGGCGACCG CCGCTTCGAC TTGGTCGTTC GATTGCCCGA GCGGCTGCGG
TCCGACGTCG AGGCGATCCG CAATCTTCCG ATCCCGCTGC CGGCCGTGGC GGAAACGCCG
ACGACTGCGA CCAAGGCGTC CTGGACAAAC TCGCCGTTGT CGCAGATGCG CTACACGCCG
TTGTCGGCGG TGGCGCAGAT CGAGGTCGCG CCCGGGCCGA ACCAGATCAG CCGCGAGAAC
GGCAAGCGCC GCATCGTGGT GACGGCGAAT GTCCGCGGGC GCGATCTCGG GTCATTCGTA
TCCGACGCTC AGGCGCAGAT CGCGACGAAG GTCAAGATTC CCGCGGGATA CTGGATCGGG
TGGGGCGGCC AGTTCGAGCA ACTCGTCTCG GCCACGAAAC GTCTGACCAT CGTCGTTCCG
GTCGCGCTGC TGCTGATCTT CCTGCTGCTG TTCGTCAGTC TCGGCTCAGC GGCGGACGCG
TTGCTGGTGT TCAGCGGCGT ACCGCTGGCG CTGACGGGCG GCGTTGCGGC TTTGCTACTC
CGCGACATTC CGCTCTCGAT CAGCGCAGGC ATCGGCTTCA TCGCGCTGTC AGGCGTCGCG
GTGCTGAACG GCCTGGTGAT CGTCTCATTC ATCGAGAAGC TCCGCGCAGA CGGCAAGACC
ATCATCGAAG CCGTCAAGGA AGGGGCTCTG ACCCGTCTGC GGCCGGTTCT GATGACAGCG
ATGGTCGCAT CGCTCGGCTT CGTGCCGATG GCGATCGCCA CCGGCGCCGG CGCCGAGGTT
CAGCGACCGC TGGCGACCGT CGTCATCGGA GGGATCATCT CGTCGACGAT CCTCACTCTG
CTCGTTCTTC CGGCGCTCTA CGTCCTGTTT CGCCGGGAAT CCTCGCCTGC CGCAGTGGAG
GCGACGCCCA ACCAGACCCA AGGAGACCAT TGA
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| Protein sequence | MINAILEFSI RQRWLVMIGV LAVAAFGAWN FTRLPIDAVP DITNVQVQVN VEAPGYSPLE
VEQRITFPVE TGMGGIPNLQ YTRSLSRYGL SQVTIVFNEG TSIFFARQQV SERLQQVKDQ
LPSGIEMAMG PISTGLGEIY TFALDARPGA KNADGSPVTP IDLRTVQDWI IKPQLRTVPG
VVEVNTIGGY EKQFHVLPDP SKLMAFRLGF RDVMTALAAN NANVGAGYIE RNGEQYLVRT
PGQVTNIDDI RGVVVGTRGG VPVRISDVAE VQIGTDLRTG AATLDGRETV LGTAMLLIGE
NSRTVSQRVS AKLDDIARSL PEGIFARVLY DRTVLVDATI ATVEKNLVEG ALLVIVILFL
ILGNFKAAIA TALVIPLSML ITITGMVESK VSANLMSLGA IDFGIIIDGA VIIVENCLRL
LAVEQHRRGR LLTRDERFAT ILAGSREVIK PSLLGTLIIA VVYLPVLTLT GVEGKMFTPM
ALTVLMALAG ASILSMTFVP AAVALLVTGK VTEKENFFMR GARRIYLPLL GLAIRHRGIV
ATLAVVLLLV SGYAASRMGG EFIPSLDEGD IAMHAMRIPG TSLTQGIDMQ LKLEKALLQL
PEVKEVFSKL GTSEVATDPM PPNVADTIIM LKPRAEWPDP KRSKADLVAA VEKQAETLPG
NVYELTQPIQ MRFNELISGV RSDVGVKIFG DDLDTLLEVA GRVQTVLQAV PGAADVKTEQ
TAGLPVLTVK LDRPALSRLG LSVTDVQGLV ETAVGGKSAG LVFEGDRRFD LVVRLPERLR
SDVEAIRNLP IPLPAVAETP TTATKASWTN SPLSQMRYTP LSAVAQIEVA PGPNQISREN
GKRRIVVTAN VRGRDLGSFV SDAQAQIATK VKIPAGYWIG WGGQFEQLVS ATKRLTIVVP
VALLLIFLLL FVSLGSAADA LLVFSGVPLA LTGGVAALLL RDIPLSISAG IGFIALSGVA
VLNGLVIVSF IEKLRADGKT IIEAVKEGAL TRLRPVLMTA MVASLGFVPM AIATGAGAEV
QRPLATVVIG GIISSTILTL LVLPALYVLF RRESSPAAVE ATPNQTQGDH
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