| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3333 |
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| Symbol | |
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| ID | 4023843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3694098 |
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| End bp | 3694982 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963537 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_570458 |
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| Protein GI | 91977799 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.199741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.666344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT CGAAAATCCG ATTGATCGCC GTTGCGTTGG TTGCGCTATC GTTGCTGGCG
CCGGTCGCGC CGATTTCCGC GCAGCAGCCG CCGGTGCAAC AGGTGCAATC CGCCGCTGCG
CCCGAGACCA AGGGGGCGAC CCAGGCGCTG ACCTCGGCCG GCGCTTCGAC GGGTGCAAGC
GTCGCGCCTG GCCTCGCCGA ATTGTCGCCA TGGACGATGT TTCTTCAGGC CGACATCGTC
GTGAAGGCGG TGATGGTCGG GCTGGCCTTC GCTTCGGTGA TCACCTGGAC CATCTTCATC
GCCAAGAAGA TCGAACTCGG TCGCGCCCGC TGGCGGTTGC GGTCCGCGCT GAAGCAGATC
GCGGAATCGC GGTCGCTCTC GGAAGCGCAG CTCGCGCTCG GCGACAGCGA TCATCTGCTG
ACATCGCTGG TGACGGCGGC CGTGCGCGAG GCGCGGCTGT CGGCCGGCAT CGCCAGCGAT
TCCGGTATCA AGGAGCGCGT CGCCTCGAGC TTCAGCGAGA TCGTGCGCGC CGAGGCGCGG
CACATGCGCC ACGGCATGGG CTTCCTCGCC TCGATCGGCG CGACGGCGCC GTTCATCGGC
CTGTTCGGCA CGGTGTGGGG CATCATGAAC AGCTTTATCG GCATCTCGAA GTCGCAGACC
ACCAACCTCG CGGTGGTTGC GCCCGGCATC GCGGAGGCGC TGCTCGCCAC CGCGATCGGC
CTGGTCGCGG CTATTCCGGC GGTGCTGATC TACAATCACT TCACCCGCGA GACCCGGGTG
TATCTCGAAC TGGTGTCGCG GGCGTCCGGC GCGGTCGGAC GGTTGCTTTC GCGCGACCTC
GACCGCGGCC ATGGTGGCGG TCATCACGCG CGCGCGGCGG AATAG
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| Protein sequence | MNLSKIRLIA VALVALSLLA PVAPISAQQP PVQQVQSAAA PETKGATQAL TSAGASTGAS
VAPGLAELSP WTMFLQADIV VKAVMVGLAF ASVITWTIFI AKKIELGRAR WRLRSALKQI
AESRSLSEAQ LALGDSDHLL TSLVTAAVRE ARLSAGIASD SGIKERVASS FSEIVRAEAR
HMRHGMGFLA SIGATAPFIG LFGTVWGIMN SFIGISKSQT TNLAVVAPGI AEALLATAIG
LVAAIPAVLI YNHFTRETRV YLELVSRASG AVGRLLSRDL DRGHGGGHHA RAAE
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