| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3331 |
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| Symbol | |
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| ID | 4023841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3692751 |
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| End bp | 3693545 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963535 |
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| Product | TonB-like |
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| Protein accession | YP_570456 |
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| Protein GI | 91977797 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.198934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.616701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGT TCGATTTCTC CCGCAAGCCG TCGCGCCCGT TGTGGCTGAT CGCCGGCGTC
GCCGCCGTCG CGCTGCATGT CGGCGGCGTC GCCTTGGCGC TGTCGCATCG CGTGGATGAT
GTTGACGACG ACGCGCTCGG CGCGCAGGCG ATCGAGGTCG GCCTCGAGAT GATGTCCCCG
AAGCACGAGG CGAGCGACCT GCCGCCGGGT CCGGAGACCG ACGCCTCTGC CGCGTCGCCG
GCGCTGAACG AGCAGAAGGC CGAGGTCAAG CAAAGCGACC TGCCGAAGGA CACTCCGCAG
CAGACCGAAG AGGCCGACCG CATCGTCACG ACCGAGCAGC CGAAAAAGCC CGACGAGGAG
CAGAAGGAAA AGGCGGTGGT GCGACAGCAG GCGTCGACCG AGTCGGTCGC GGCCGAAGCC
ACCGCGATGC CGAGCAACGA AACCGCCAAG GAAGGCCCGC GCTCGGTCGC GCCGGCCCAG
GGCGTAGGCC AGGCCGCGCA GCGCATTCGC GCCACCTGGC AGAAGGAGCT CGTCGCCTAT
CTCGACAAGC ACAAGCGCTA CCCGAAGGAA GGGGCTCAGA AGAACGTCAA GATCGTGGTC
AGCTTCGAAC TCGACCGGCT CGGCCACGTG CTCTCGACCA GGATCGTCGA AGGCTCCGGC
GACGCCGCCT TCGATCAGGC CGCGCTCGAC ATGGTCAGGC GCTCCGACCC GGTCCCCGCA
CCGCCGCCGC TGATCGCCGA CGAAGGCCTC ACCTTCAGCC TGCCGGTGAT TTTCCGGACC
AAGGGGAAGG GCTGA
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| Protein sequence | MTEFDFSRKP SRPLWLIAGV AAVALHVGGV ALALSHRVDD VDDDALGAQA IEVGLEMMSP
KHEASDLPPG PETDASAASP ALNEQKAEVK QSDLPKDTPQ QTEEADRIVT TEQPKKPDEE
QKEKAVVRQQ ASTESVAAEA TAMPSNETAK EGPRSVAPAQ GVGQAAQRIR ATWQKELVAY
LDKHKRYPKE GAQKNVKIVV SFELDRLGHV LSTRIVEGSG DAAFDQAALD MVRRSDPVPA
PPPLIADEGL TFSLPVIFRT KGKG
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