| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3324 |
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| Symbol | |
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| ID | 4023834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3683658 |
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| End bp | 3685466 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963528 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_570449 |
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| Protein GI | 91977790 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA TCACCCCGGG GACTGCCCGG CGCAAGCTCC GCTCCAGCGA ATGGTTCAAC
GACCCGCACA ACCCCGCGAT GACCGCGCTG TATCTCGAGC GCTATCTGAA CTACGGGCTG
ACCCGCGGCG AGCTGCAATC CGGCAAGCCG ATCATCGGCA TCGCGCAAAC CGGAAACGAT
TTGTCGCCGT GCAACCGCCA TCATCTGGAA TTGGCGCAGC GTGTCCGCGA AGGCATCCGC
GCCGCCGGCG GCATCGCGAT GGAATTCCCG GTGCATCCGA TCCAGGAAAC CGGCAAGCGG
CCGACTGCGG CGCTCGATCG CAATCTCGCT TATCTCGGCC TGGTCGAGAT CTTGTTCAGC
TATCCGCTCG ACGGCGTGGT GCTAACCACA GGTTGCGACA AGACCACGCC AGCCTGCCTG
ATGGCGGCGG CGACCGTCAA CATCCCGGCG ATCGTGCTGT CCGGCGGGCC GATGCTGAAC
GGCTGGCACA ATGGCGAACG CTCCGGATCG GGCACAGTGG TCTGGAAATC CCGCGAGCGC
CTCGCCGCCG GCGAGATCGA CTACGAAGAG TTCATGGAGA TCGTCGCATC GTCGGCGCCG
TCGGTCGGCC ATTGCAACAC CATGGGCACC GCCTCGACGA TGAACTCGCT GGCGGAAGCG
CTCGGCATGT CGCTGCCGGG CTGCGCCGCG ATTCCTGCGC CCTATCGCGA ACGCGGCCAG
ATCGCCTACG CCACCGGCCT GCGGGCGGTG GAGATGGTGT GGGAGGATCT GAAGCCGTCC
GACATCCTGA CCCGCAAAGC TTTCGAGAAC GCCATCGTCG TCAATTCGGC GATCGGCGGC
TCGACCAACG CGCCGATCCA TCTCAATGCA CTCGCCCGCC ACATCGGCGT CGAGCTTTCG
ATCGACGACT GGCAGAGCGT CGGCCACGCC ATTCCGCTGC TGGTCAACAT GCAGCCGGCC
GGCTTCTATC TCGGCGAGGA GTATCACCGC GCCGGCGGCG TGCCGGCGGT GGTCCGCGAA
CTGATGAGGC ACGGCAAAAT TCATACGGAC GCGATCACCG TCAACGGCCG TACCATGGGC
GACAATTGCG CGTCGGCCCC CGCCCCCGAT GGCGAGGTGA TCAAGTCCTA CGACGGGCCG
CTGGTGCAGG ACGCCGGATT CCTGGTGCTG CGCGGCAATC TGTTCGACTC GGCGATCATG
AAGACCAGCG TGATCTCGCT GGAATTCCGC GAGCGCTATC TCGCCAATCC GAACGATCCG
AACGCGTTCG AGGGCCGCGC CATCGTGTTC GAAGGGCCGG AAGACTATCA CGACAGGATC
GACGATCCGG CGCTCGACAT CGATGAGCAT TGCATCCTGT TCGTGCGCGG CACCGGGCCG
ATCGGCTATC CCGGTGGCGC CGAGGTGGTG AACATGCAGC CGCCGGCGGC GCTGATCAAA
CGCGGCATCC ACTCGCTGCC CTGCATCGGC GACGGCCGCC AGTCCGGCAC CTCGGGCTCG
CCCTCGATCC TGAACGCGAC ACCAGAAGCC GCCGCCAATG GCGGGCTCGC GATCCTCAAG
ACCGGCGACC GCGTCCGCGT CGACCTGAAC AAAGGGAGCG CCAACATTCT GATATCGGAC
GATGAACTGC GGCAGCGCCG CGCCGACCTC GAGGCGCATG GCGGCTTCGC CTATCCGAAG
CATCAGACGC CGTGGCAGGA GCTGTATCGC GCCACGGTCG GCCAGCAGGC CACCGGCGCC
TGCCTCGAAC TCGCCACCCG CTATCGCGAC ATCGCCGGCA CCGTCGGCGT CGCGCGGCAC
AATCATTGA
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| Protein sequence | MNKITPGTAR RKLRSSEWFN DPHNPAMTAL YLERYLNYGL TRGELQSGKP IIGIAQTGND
LSPCNRHHLE LAQRVREGIR AAGGIAMEFP VHPIQETGKR PTAALDRNLA YLGLVEILFS
YPLDGVVLTT GCDKTTPACL MAAATVNIPA IVLSGGPMLN GWHNGERSGS GTVVWKSRER
LAAGEIDYEE FMEIVASSAP SVGHCNTMGT ASTMNSLAEA LGMSLPGCAA IPAPYRERGQ
IAYATGLRAV EMVWEDLKPS DILTRKAFEN AIVVNSAIGG STNAPIHLNA LARHIGVELS
IDDWQSVGHA IPLLVNMQPA GFYLGEEYHR AGGVPAVVRE LMRHGKIHTD AITVNGRTMG
DNCASAPAPD GEVIKSYDGP LVQDAGFLVL RGNLFDSAIM KTSVISLEFR ERYLANPNDP
NAFEGRAIVF EGPEDYHDRI DDPALDIDEH CILFVRGTGP IGYPGGAEVV NMQPPAALIK
RGIHSLPCIG DGRQSGTSGS PSILNATPEA AANGGLAILK TGDRVRVDLN KGSANILISD
DELRQRRADL EAHGGFAYPK HQTPWQELYR ATVGQQATGA CLELATRYRD IAGTVGVARH
NH
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