Gene RPD_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3318 
Symbol 
ID4023828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3676349 
End bp3677518 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content66% 
IMG OID637963522 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_570443 
Protein GI91977784 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GCATCGTTGG ATGGGCGCAT ATGCCCTTCG GCAAATTCGA CGCCGAGACC 
GTCGAGAGCA TGATCGTCCG GGTCGCGAAC GAAGCCATCG CGGACGCCGG TATCGCGGCG
GGTGACGTCG ATGAAATCGT GCTCGGTCAT TTCAACGCCG GCTTCTCGCC GCAGGATTTC
ACCGCGGCGC TGGTGCTGCA GGCCGATCCG GCGCTGCGCT TCAAGCCCGC CACCCGCGTC
GAGAACGCCT GCGCCACCGG CTCCGCCGCC GTGCATCAGG GCATCCGCGC CATCGAAGCG
GGCCACGCCA AGGTGGTCCT GGTCGTCGGC GTCGAGCAGA TGACCCGGAC GCCGGGCCCG
GAGATCGGCA AGAATCTGCT GCGCGCCTCG TATCTGCCGG AAGACGGCGA GACGCCTGCC
GGCTTCGCCG GCGTGTTCGG CATCATTGCG CAGAAGTACT TTCAGAAATA CGGCGACCAG
TCCGACGCCC TCGCCATGAT CGCCGCCAAG AATCACCACA ACGGCGTGTC CAATCCCTAC
GCGCAGATGC GTAAGGACGT TGGCTTCGAG TTCTGTCGCG CCGAGGGCGA CAAGAACCCG
TTCGTCGCCG GTCCCTTGAA GCGCACCGAC TGCTCGCTGG TGTCCGACGG TGCGGCGGCC
TTGGTGCTGA CCTCCGCCGA GAACGCCAAG ACGATGGGCA AGGCCGTCAA CATCCGCGCC
ACCGCACACG CGCAGGACTT CCTGCCGATG TCGAAGCGCG ACATCCTGCA GTTCGAAGGC
TGCACGCTCG CCTGGCAGCG TGCGCTGGAG CAGGCCGGCG TCACGCTGAA CGATCTGTCC
TTCGTCGAGA CCCATGACTG CTTCACCATC GCCGAACTGA TCGAGTATGA AGCGATGGGG
CTGACGCCGA AGGGGCAGGG CGCGCGCGCG ATCAAGGAAG GCTGGACTCT GAAGACCGGC
AAGCTGCCGA TCAATCCGTC CGGCGGTCTC AAGGCCAAGG GCCATCCGAT CGGCGCCACC
GGCGTGTCGA TGCACGTGCT GACCGCGATG CAGCTGCTCG GCCAGGCGCC GGAAGGGATG
CAGATCAAGG ACGCCAAGCT CGGCGGCATC TTCAACATGG GCGGCGCCGC AGTCGCCAAC
TACGTCTCGG TGCTCGAGCC GGCGAAGTAA
 
Protein sequence
MTASIVGWAH MPFGKFDAET VESMIVRVAN EAIADAGIAA GDVDEIVLGH FNAGFSPQDF 
TAALVLQADP ALRFKPATRV ENACATGSAA VHQGIRAIEA GHAKVVLVVG VEQMTRTPGP
EIGKNLLRAS YLPEDGETPA GFAGVFGIIA QKYFQKYGDQ SDALAMIAAK NHHNGVSNPY
AQMRKDVGFE FCRAEGDKNP FVAGPLKRTD CSLVSDGAAA LVLTSAENAK TMGKAVNIRA
TAHAQDFLPM SKRDILQFEG CTLAWQRALE QAGVTLNDLS FVETHDCFTI AELIEYEAMG
LTPKGQGARA IKEGWTLKTG KLPINPSGGL KAKGHPIGAT GVSMHVLTAM QLLGQAPEGM
QIKDAKLGGI FNMGGAAVAN YVSVLEPAK